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Hkdc1
Gene Detail
 Symbol
Name
ID
Hkdc1
hexokinase domain containing 1
MGI:2384910
Synonyms MGC:28816
Feature Type protein coding gene
Genetic Map
Chromosome 10
32.40 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr10:62383137-62422491 bp, - strand
From VEGA annotation of GRCm38

  39355 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:128937  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: hexokinase I
Gene Tree: Hkdc1

Human
homologs
Human Homolog HKDC1, hexokinase domain containing 1
NCBI Gene ID 80201
neXtProt AC  NX_Q2TB90
Human Chr (Location)  10q22.1; chr10:69220303-69267559 (+)  GRCh38
Alleles
and
phenotypes
All alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (18 annotations)
Process carbohydrate metabolic process, carbohydrate phosphorylation, ...
Component cytosol
Function ATP binding, fructokinase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (6 records)
Data Summary: Results (376)    Tissues (119)    Images (79)
Theiler Stages: 22, 23, 24, 26, 28
Assay TypeResults
RNA in situ 376
cDNA source data(14)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(15) cDNA(15)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000024651 (Evidence)
Ensembl Gene ModelENSMUSG00000020080 (Evidence)
Entrez Gene216019 (Evidence)
UniGene213213
DFCITC1587311, TC1612518
DoTSDT.94215497, DT.97345227
NIA Mouse Gene IndexU031847
EC2.7.1.1
Consensus CDS ProjectCCDS23888.1
International Mouse Knockout Project StatusHkdc1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024651 VEGA Gene Model | MGI Sequence Detail 39355 C57BL/6J ±  kb
transcript OTTMUST00000060622 VEGA | MGI Sequence Detail 3517 Not Applicable 
polypeptide OTTMUSP00000029588 VEGA | MGI Sequence Detail 915 Not Applicable 

For the selected sequences
All sequences(26) RefSeq(4) UniProt(1)
Polymorphisms SNPs within 2kb(214 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001312 Hexokinase
InterPro IPR019807 Hexokinase, conserved site
InterPro IPR022673 Hexokinase, C-terminal
InterPro IPR022672 Hexokinase, N-terminal
Protein Ontology PR:000029546 hexokinase HKDC1
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:193822 Lumayag S, et al., Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration. Proc Natl Acad Sci U S A. 2013 Feb 5;110(6):E507-16
All references(36)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory