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Ginm1 Gene Detail
Summary
  • Symbol
    Ginm1
  • Name
    glycoprotein integral membrane 1
  • Synonyms
    BC013529, MGC:19209
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384905
    NCBI Gene: 215751
Location & Maps
more
  • Sequence Map
    Chr10:7767947-7792824 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      24878 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 2.35 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    GINM1, glycoprotein integral membrane 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    GINM1, glycoprotein integral membrane 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C6orf72, dJ12G14.2
  • Links
    NCBI Gene ID: 116254
    neXtProt AC: NX_Q9NU53

  • Chr Location
    6q25.1; chr6:149566392-149590931 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Gene trapped
    1
  • Targeted
    3
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033593 VEGA Gene Model | MGI Sequence Detail 24878 C57BL/6J ±  kb
transcript OTTMUST00000084629 VEGA | MGI Sequence Detail 1525 Not Applicable  
polypeptide OTTMUSP00000045635 VEGA | MGI Sequence Detail 328 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    266 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000032268 glycoprotein integral membrane protein 1
Molecular
Reagents
less
  • All nucleic 66
    cDNA 66

    Microarray probesets 4
Other
Accession IDs
less
MGI:2143501
References
more
  • Summaries
    All 31
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory