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Ginm1 Gene Detail
Summary
  • Symbol
    Ginm1
  • Name
    glycoprotein integral membrane 1
  • Synonyms
    BC013529, MGC:19209
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384905
    NCBI Gene: 215751
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:7643711-7656681 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 2.35 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    136 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2384905
protein coding gene Chr10:7643711-7668588 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016999
protein coding gene Chr10:4994097-5019069 (-)
A/J MGP_AJ_G0016977
protein coding gene Chr10:4747409-4772744 (-)
AKR/J MGP_AKRJ_G0016941
protein coding gene Chr10:4841328-4866271 (-)
BALB/cJ MGP_BALBcJ_G0016935
protein coding gene Chr10:4719204-4744291 (-)
C3H/HeJ MGP_C3HHeJ_G0016760
protein coding gene Chr10:4972135-4997245 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017397
protein coding gene Chr10:5109247-5134103 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015102
protein coding gene Chr10:4340135-4363921 (-)
CAST/EiJ MGP_CASTEiJ_G0016342
protein coding gene Chr10:4889444-4914437 (-)
CBA/J MGP_CBAJ_G0016732
protein coding gene Chr10:5265499-5291036 (-)
DBA/2J MGP_DBA2J_G0016840
protein coding gene Chr10:4675559-4700792 (-)
FVB/NJ MGP_FVBNJ_G0016835
protein coding gene Chr10:4622881-4648003 (-)
LP/J MGP_LPJ_G0016915
protein coding gene Chr10:4837481-4862407 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016865
protein coding gene Chr10:5220028-5246030 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017435
protein coding gene Chr10:4793805-4818913 (-)
PWK/PhJ MGP_PWKPhJ_G0016127
protein coding gene Chr10:4648580-4674197 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015909
protein coding gene Chr10:4868320-4895392 (-)
WSB/EiJ MGP_WSBEiJ_G0016404
protein coding gene Chr10:4795129-4820073 (-)



Homology
more
  • Human Ortholog
    GINM1, glycoprotein integral membrane 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GINM1, glycoprotein integral membrane 1
  • Synonyms
    C6orf72
  • Links
    NCBI Gene ID: 116254
    neXtProt AC: NX_Q9NU53
    UniProt: Q9NU53

  • Chr Location
    6q25.1; chr6:149566392-149590931 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 215751 NCBI Gene Model | MGI Sequence Detail 12971 C57BL/6J ±  kb
transcript NM_001346750 RefSeq | MGI Sequence Detail 1560 C57BL/6  
polypeptide Q91WR6 UniProt | EBI | MGI Sequence Detail 327 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 67
    cDNA 67

    Microarray probesets 4
Other
Accession IDs
less
MGI:2143501
References
more
  • Summaries
    All 32
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:228563 Koscielny G, et al., The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Nucleic Acids Res. 2014 Jan;42(Database issue):D802-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support.
last database update
01/18/2022
MGI 6.17
The Jackson Laboratory