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Slc24a1
Gene Detail
 Symbol
Name
ID
Slc24a1
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
MGI:2384871
Synonyms MGC:27617
Feature Type protein coding gene
Genetic Map
Chromosome 9
35.00 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr9:64922861-64951607 bp, - strand
From NCBI annotation of GRCm38

  28747 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3472  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Slc24a1

Human
homologs
Human Homolog SLC24A1, solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
NCBI Gene ID 9187
neXtProt AC  NX_O60721
Human Synonyms  CSNB1D, HsT17412, NCKX, NCKX1, RODX
Human Chr (Location)  15q22; chr15:65611280-65660996 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human SLC24A1
Alleles
and
phenotypes
All alleles(3) : Gene trapped(3)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process calcium ion transmembrane transport, potassium ion transmembrane transport, ...
Component integral component of membrane, intrinsic component of plasma membrane, ...
Function calcium, potassium:sodium antiporter activity
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (10)    Tissues (7)    Images (6)
Theiler Stages: 23, 24, 28
Assay TypeResults
RNA in situ 10
cDNA source data(26)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(27) cDNA(26) Primer pair(1)
Microarray probesets(2)
Other database
links
Ensembl Gene ModelENSMUSG00000034452 (Evidence)
Entrez Gene214111 (Evidence)
UniGene156124
DFCITC1583829
DoTSDT.99868942
NIA Mouse Gene IndexU031000
Consensus CDS ProjectCCDS23283.1
International Mouse Knockout Project StatusSlc24a1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 214111 NCBI Gene Model | MGI Sequence Detail 28747 C57BL/6J ±  kb
transcript NM_144813 RefSeq | MGI Sequence Detail 5244 Not Specified 
polypeptide NP_659062 RefSeq | MGI Sequence Detail 1130 Not Specified 

For the selected sequences
All sequences(14) RefSeq(4) UniProt(1)
Polymorphisms SNPs within 2kb(221 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004817 K+-dependent Na+/Ca+ exchanger
InterPro IPR004837 Sodium/calcium exchanger membrane region
InterPro IPR004481 Sodium/potassium/calcium exchanger
Protein Ontology PR:000014998 sodium/potassium/calcium exchanger 1
References (Earliest) J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(25)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory