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Casd1 Gene Detail
Summary
  • Symbol
    Casd1
  • Name
    CAS1 domain containing 1
  • Synonyms
    Cast1, MGC:6840
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384865
    NCBI Gene: 213819
Location & Maps
more
  • Genetic Map
    Chromosome 6, 1.81 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    CASD1, CAS1 domain containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CASD1, CAS1 domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C7orf12, NBLA04196, SOAT
  • Links
    NCBI Gene ID: 64921
    neXtProt AC: NX_Q96PB1
    UniProt: Q96PB1

  • Chr Location
    7q21.3; chr7:94509858-94633465 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 11287
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CASD1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023445 VEGA Gene Model | MGI Sequence Detail 42517 C57BL/6J ±  kb
transcript OTTMUST00000057000 VEGA | MGI Sequence Detail 3961 Not Applicable  
polypeptide OTTMUSP00000027448 VEGA | MGI Sequence Detail 797 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    30 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 56
    cDNA 55
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 25
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 4
  • Earliest
    J:84436 Ono R, et al., Identification of a large novel imprinted gene cluster on mouse proximal chromosome 6. Genome Res. 2003 Jul;13(7):1696-705
  • Latest
    J:153882 Wang X, et al., A protein interaction node at the neurotransmitter release site: domains of Aczonin/Piccolo, Bassoon, CAST, and rim converge on the N-terminal domain of Munc13-1. J Neurosci. 2009 Oct 7;29(40):12584-96

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/08/2017
MGI 6.10
The Jackson Laboratory