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Slc44a3 Gene Detail
Summary
  • Symbol
    Slc44a3
  • Name
    solute carrier family 44, member 3
  • Synonyms
    MGC:18084, MGC:38127
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384860
    NCBI Gene: 213603
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:121459528-121532344 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 52.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    864 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2384860
protein coding gene Chr3:121459528-121532404 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027831
protein coding gene Chr3:123649709-123727018 (-)
A/J MGP_AJ_G0027789
protein coding gene Chr3:119531692-119604560 (-)
AKR/J MGP_AKRJ_G0027755
protein coding gene Chr3:122576157-122650307 (-)
BALB/cJ MGP_BALBcJ_G0027801
protein coding gene Chr3:119350245-119422674 (-)
C3H/HeJ MGP_C3HHeJ_G0027532
protein coding gene Chr3:122971857-123045091 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028247
protein coding gene Chr3:128134055-128214466 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025586
protein coding gene Chr3:114964508-115038348 (-)
CAST/EiJ MGP_CASTEiJ_G0026988
protein coding gene Chr3:122342661-122417572 (-)
CBA/J MGP_CBAJ_G0027507
protein coding gene Chr3:132469869-132551633 (-)
DBA/2J MGP_DBA2J_G0027648
protein coding gene Chr3:118688093-118761209 (-)
FVB/NJ MGP_FVBNJ_G0027616
protein coding gene Chr3:116297023-116371040 (-)
LP/J MGP_LPJ_G0027758
protein coding gene Chr3:125173574-125251378 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027646
protein coding gene Chr3:140099519-140174868 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028303
protein coding gene Chr3:122130009-122205232 (-)
PWK/PhJ MGP_PWKPhJ_G0026714
protein coding gene Chr3:118380413-118454434 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026537
protein coding gene Chr3:120197707-120282768 (-)
WSB/EiJ MGP_WSBEiJ_G0027068
protein coding gene Chr3:122849080-122927172 (-)



Homology
more
  • Human Ortholog
    SLC44A3, solute carrier family 44 member 3
  • Vertebrate Orthologs
    8
  • Human Ortholog
    SLC44A3, solute carrier family 44 member 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CTL3
  • Links
    NCBI Gene ID: 126969
    neXtProt AC: NX_Q8N4M1
    UniProt: Q8N4M1

  • Chr Location
    1p21.3; chr1:94820342-94895247 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 213603 NCBI Gene Model | MGI Sequence Detail 72817 C57BL/6J ±  kb
    transcript NM_145394 RefSeq | MGI Sequence Detail 2589 C57BL/6  
    polypeptide Q921V7 UniProt | EBI | MGI Sequence Detail 656 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 25
      cDNA 24
      Primer pair 1

      Microarray probesets 3
    References
    more
    • Summaries
      All 33
      Developmental Gene Expression 1
      Diseases 1
      Gene Ontology 1
      Phenotypes 12
    • Earliest
      J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
    • Latest
      J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    last database update
    01/07/2020
    MGI 6.14
    The Jackson Laboratory