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Tapbpl Gene Detail
Summary
  • Symbol
    Tapbpl
  • Name
    TAP binding protein-like
  • Synonyms
    MGC:27679, TAPBPL-R
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384853
    NCBI Gene: 213233
Location & Maps
more
  • Sequence Map
    Chr6:125223933-125231860 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      7928 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 59.32 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    TAPBPL, TAP binding protein like
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TAPBPL, TAP binding protein like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    TAPBPR, TAPBP-R
  • Links
    NCBI Gene ID: 55080
    neXtProt AC: NX_Q9BX59

  • Chr Location
    12p13.31; chr12:6451655-6462322 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 9958
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: TAPBPL
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
  • All Mutations and Alleles
    2
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000034697 VEGA Gene Model | MGI Sequence Detail 7928 C57BL/6J ±  kb
transcript OTTMUST00000088109 VEGA | MGI Sequence Detail 2352 Not Applicable  
polypeptide OTTMUSP00000048007 VEGA | MGI Sequence Detail 451 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    65 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000016054 tapasin-related protein
  • InterPro Domains
    IPR003597 Immunoglobulin C1-set
    IPR007110 Immunoglobulin-like domain
    IPR013783 Immunoglobulin-like fold
    IPR003006 Immunoglobulin/major histocompatibility complex, conserved site
    IPR003599 Immunoglobulin subtype
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 4
References
more
  • Summaries
    All 21
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/20/2016
MGI 6.05
The Jackson Laboratory