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Tapbpl Gene Detail
Summary
  • Symbol
    Tapbpl
  • Name
    TAP binding protein-like
  • Synonyms
    MGC:27679, TAPBPL-R
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384853
    NCBI Gene: 213233
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:125223933-125231860 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 59.32 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    65 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2384853
protein coding gene Chr6:125223927-125231923 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031292
protein coding gene Chr6:128564932-128572810 (-)
A/J MGP_AJ_G0031262
protein coding gene Chr6:123709834-123717809 (-)
AKR/J MGP_AKRJ_G0031190
protein coding gene Chr6:127089911-127097828 (-)
BALB/cJ MGP_BALBcJ_G0031270
protein coding gene Chr6:123307253-123315189 (-)
C3H/HeJ MGP_C3HHeJ_G0030993
protein coding gene Chr6:127158481-127166740 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031726
protein coding gene Chr6:131954029-131961938 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028875
protein coding gene Chr6:120922031-120927743 (-)
CAST/EiJ MGP_CASTEiJ_G0030374
protein coding gene Chr6:127366028-127373960 (-)
CBA/J MGP_CBAJ_G0030954
protein coding gene Chr6:137000565-137008432 (-)
DBA/2J MGP_DBA2J_G0031110
protein coding gene Chr6:122641641-122649697 (-)
FVB/NJ MGP_FVBNJ_G0031060
protein coding gene Chr6:121554656-121563023 (-)
LP/J MGP_LPJ_G0031190
protein coding gene Chr6:128722979-128730895 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031098
protein coding gene Chr6:141031916-141039878 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031761
protein coding gene Chr6:126991678-126999587 (-)
PWK/PhJ MGP_PWKPhJ_G0030089
protein coding gene Chr6:120885517-120893578 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029918
protein coding gene Chr6:125066248-125074176 (-)
WSB/EiJ MGP_WSBEiJ_G0030459
protein coding gene Chr6:127359733-127367652 (-)



Homology
more
  • Human Ortholog
    TAPBPL, TAP binding protein like
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TAPBPL, TAP binding protein like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    TAPBPR, TAPBP-R
  • Links
    NCBI Gene ID: 55080
    neXtProt AC: NX_Q9BX59
    UniProt: Q9BX59

  • Chr Location
    12p13.31; chr12:6451655-6472006 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 9958
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: TAPBPL
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038213 Ensembl Gene Model | MGI Sequence Detail 7928 C57BL/6J ±  kb
transcript ENSMUST00000043422 Ensembl | MGI Sequence Detail 2352 Not Applicable  
polypeptide ENSMUSP00000047105 Ensembl | MGI Sequence Detail 451 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 4
References
more
  • Summaries
    All 24
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:76950 Teng MS, et al., A human TAPBP (TAPASIN)-related gene, TAPBP-R. Eur J Immunol. 2002 Apr;32(4):1059-68
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory