About   Help   FAQ
BC016579 Gene Detail
Summary
  • Symbol
    BC016579
  • Name
    cDNA sequence, BC016579
  • Synonyms
    MGC:27720
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384848
    NCBI Gene: 212998
Location & Maps
more
  • Sequence Map
    Chr16:45626848-45654118 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      27271 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 29.76 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    C3orf52, chromosome 3 open reading frame 52
  • Vertebrate Orthologs
    9
  • Human Ortholog
    C3orf52, chromosome 3 open reading frame 52
    Orthology source: HomoloGene, HGNC
  • Synonyms
    TTMP
  • Links
    NCBI Gene ID: 79669
    neXtProt AC: NX_Q5BVD1

  • Chr Location
    3q13.2; chr3:112086335-112131095 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000033187 Ensembl Gene Model | MGI Sequence Detail 27271 C57BL/6J ±  kb
transcript ENSMUST00000036732 Ensembl | MGI Sequence Detail 2192 Not Applicable  
polypeptide ENSMUSP00000037651 Ensembl | MGI Sequence Detail 218 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    383 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR033223 TPA-induced transmembrane protein
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
References
more
  • Summaries
    All 14
    Gene Ontology 1
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/13/2016
MGI 6.05
The Jackson Laboratory