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Slc25a38
Gene Detail
Symbol

Name
ID
Slc25a38
solute carrier family 25, member 38
MGI:2384782
Synonyms
MGC:18873
Feature Type
protein coding gene
Genetic Map
Chromosome 9
71.40 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr9:120110374-120124504 bp, + strand
From VEGA annotation of GRCm38

  14131 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:5553  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

HCOP human homology predictions: SLC25A38
Gene Tree: Slc25a38

Human
homologs
SLC25A38, solute carrier family 25, member 38
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 54977
neXtProt AC: NX_Q96DW6

Human Chr (Location): 3p22.1; chr3:39383324-39397328 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human SLC25A38

Mutations,
alleles, and
phenotypes
All mutations/alleles(19) : Gene trapped(16) Targeted(3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Slc25a38 interacts with 88 markers (Mir15a, Mir15b, Mir16-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process erythrocyte differentiation, heme biosynthetic process, ...
Component integral component of membrane, membrane, ...
Function transporter activity
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (64)    Tissues (8)    Images (24)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 64
cDNA source data(53)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase slc25a38    NEW 
Molecular
reagents
All nucleic(54) cDNA(53) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000033822 (Evidence)
Ensembl Gene Model ENSMUSG00000032519 (Evidence)
Entrez Gene 208638 (Evidence)
UniGene 236656
DFCI TC1580321, TC1689294
DoTS DT.533242, DT.110613447, DT.101363366
NIA Mouse Gene Index U011153
Consensus CDS Project CCDS23622.1
International Mouse Phenotyping Consortium Status Slc25a38
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033822 VEGA Gene Model | MGI Sequence Detail 14131 C57BL/6J ±  kb
transcript OTTMUST00000085200 VEGA | MGI Sequence Detail 1791 Not Applicable 
polypeptide OTTMUSP00000045995 VEGA | MGI Sequence Detail 326 Not Applicable 

For the selected sequences
All sequences(57) RefSeq(16) UniProt(4)
Polymorphisms
SNPs within 2kb(141 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR023395 Mitochondrial carrier domain
InterPro IPR018108 Mitochondrial substrate/solute carrier
Protein Ontology PR:000030786 solute carrier family 25 member 38
References
(Earliest) J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(37)
Other
accession IDs
MGI:2143250

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory