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BC023105 Pseudogene Detail
Summary
  • Symbol
    BC023105
  • Name
    cDNA sequence BC023105
  • Synonyms
    MGC:28198
  • Feature Type
    pseudogene
  • IDs
    MGI:2384767
    NCBI Gene: 667597
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr18:60574837-60576052 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 18, 34.36 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    37 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2384767
pseudogene Chr18:60572466-60576925 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036424
pseudogene Chr18:60247614-60249755 (+)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0036910
pseudogene Chr18:61907528-61908758 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034023
pseudogene Chr18:57013721-57014947 (+)
CAST/EiJ MGP_CASTEiJ_G0035290
pseudogene Chr18:59357157-59358386 (+)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0036195
pseudogene Chr18:56752252-56753482 (+)
LP/J MGP_LPJ_G0036293
pseudogene Chr18:60120146-60122179 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0037023
pseudogene Chr18:59444345-59445575 (+)
PWK/PhJ MGP_PWKPhJ_G0035040
pseudogene Chr8:106419782-106421111 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034805
pseudogene Chr18:59543354-59544583 (+)
WSB/EiJ MGP_WSBEiJ_G0035482
pseudogene Chr18:59307473-59308703 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000063388 Ensembl Gene Model | MGI Sequence Detail 1216 C57BL/6J ±  kb
transcript ENSMUST00000073997 Ensembl | MGI Sequence Detail 1216 Not Applicable  
polypeptide Q8R5A7 UniProt | EBI | MGI Sequence Detail 410 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007743 Immunity-related GTPases-like
    IPR030385 IRG-type guanine nucleotide-binding (G) domain
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 11
  • Earliest
    J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
  • Latest
    J:144087 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform. Database Download. 2009;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory