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BC023105 Pseudogene Detail
Summary
  • Symbol
    BC023105
  • Name
    cDNA sequence BC023105
  • Synonyms
    MGC:28198
  • Feature Type
    pseudogene
  • IDs
    MGI:2384767
    NCBI Gene: 667597
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr18:60441765-60442980 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 34.36 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    52 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2384767
pseudogene Chr18:60438431-60444274 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036424
pseudogene Chr18:60247614-60249755 (+)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0036910
pseudogene Chr18:61907528-61908758 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034023
pseudogene Chr18:57013721-57014947 (+)
CAST/EiJ MGP_CASTEiJ_G0035290
pseudogene Chr18:59357157-59358386 (+)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0036195
pseudogene Chr18:56752252-56753482 (+)
LP/J MGP_LPJ_G0036293
pseudogene Chr18:60120146-60122179 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0037023
pseudogene Chr18:59444345-59445575 (+)
PWK/PhJ MGP_PWKPhJ_G0035040
pseudogene Chr8:106419782-106421111 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034805
pseudogene Chr18:59543354-59544583 (+)
WSB/EiJ MGP_WSBEiJ_G0035482
pseudogene Chr18:59307473-59308703 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000063388 Ensembl Gene Model | MGI Sequence Detail 1216 C57BL/6J ±  kb
transcript ENSMUST00000073997 Ensembl | MGI Sequence Detail 1216 Not Applicable  
polypeptide Q8R5A7 UniProt | EBI | MGI Sequence Detail 410 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007743 Immunity-related GTPases-like
    IPR030385 IRG-type guanine nucleotide-binding (G) domain
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 12
  • Earliest
    J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
  • Latest
    J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory