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Zfp280d
Gene Detail
 Symbol
Name
ID
Zfp280d
zinc finger protein 280D
MGI:2384583
Synonyms MGC:36902, Suhw4
Feature Type protein coding gene
Genetic Map
Chromosome 9
40.08 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr9:72274860-72363777 bp, + strand
From VEGA annotation of GRCm38

  88918 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:17151  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Zfp280d

Human
homologs
Human Homolog ZNF280D, zinc finger protein 280D
NCBI Gene ID 54816
neXtProt AC  NX_Q6N043
Human Synonyms  SUHW4, ZNF634
Human Chr (Location)  15q21.3; chr15:56630176-56734086 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(100) : Gene trapped(98) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Zfp280d interacts with 293 markers (Mir1a-1, Mir1a-2, Mir9-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process regulation of transcription, DNA-templated, transcription, DNA-templated
Component nucleus
Function DNA binding, metal ion binding
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (55)    Tissues (18)    Images (16)
Theiler Stages: 2, 3, 4, 5, 23, 28
Assay TypeResults
RNA in situ 47
RT-PCR 8
cDNA source data(99)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(101) cDNA(100) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000044709 (Evidence)
Ensembl Gene ModelENSMUSG00000038535 (Evidence)
Entrez Gene235469 (Evidence)
UniGene242791
DFCITC1578082, TC1593862, TC1605809, TC1615424
DoTSDT.101186676, DT.101249221, DT.101291090, DT.101377815, DT.102551358, DT.531014, DT.55151630, DT.87040752, DT.94184963, DT.99623436
Consensus CDS ProjectCCDS40683.1
International Mouse Knockout Project StatusZfp280d
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000044709 VEGA Gene Model | MGI Sequence Detail 88918 C57BL/6J ±  kb
transcript OTTMUST00000117557 VEGA | MGI Sequence Detail 4387 Not Applicable 
polypeptide OTTMUSP00000065714 VEGA | MGI Sequence Detail 974 Not Applicable 

For the selected sequences
All sequences(130) RefSeq(18) UniProt(13)
Polymorphisms SNPs within 2kb(338 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR025243 Domain of unknown function DUF4195
InterPro IPR007087 Zinc finger, C2H2
InterPro IPR015880 Zinc finger, C2H2-like
Protein Ontology PR:000017803 zinc finger protein 280D
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(36)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory