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Msantd2 Gene Detail
Summary
  • Symbol
    Msantd2
  • Name
    Myb/SANT-like DNA-binding domain containing 2
  • Synonyms
    2810450G17Rik, 9530092B10Rik, BC024479, MGC:37388
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384579
    NCBI Gene: 235184
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:37489319-37524625 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 20.77 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    227 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2384579
protein coding gene Chr9:37487762-37526113 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034565
protein coding gene Chr9:35480075-35521183 (+)
A/J MGP_AJ_G0034544
protein coding gene Chr9:34532394-34568581 (+)
AKR/J MGP_AKRJ_G0034471
protein coding gene Chr9:35290752-35327084 (+)
BALB/cJ MGP_BALBcJ_G0034535
protein coding gene Chr9:34371098-34406415 (+)
C3H/HeJ MGP_C3HHeJ_G0034248
protein coding gene Chr9:35720097-35756320 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035057
protein coding gene Chr9:36618556-36656498 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031983
protein coding gene Chr9:33637604-33672085 (+)
CAST/EiJ MGP_CASTEiJ_G0033569
protein coding gene Chr9:35417158-35455058 (+)
CBA/J MGP_CBAJ_G0034221
protein coding gene Chr9:37879670-37921547 (+)
DBA/2J MGP_DBA2J_G0034379
protein coding gene Chr9:34578953-34615016 (+)
FVB/NJ MGP_FVBNJ_G0034320
protein coding gene Chr9:33832079-33867898 (+)
LP/J MGP_LPJ_G0034464
protein coding gene Chr9:35661552-35699447 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034366
protein coding gene Chr9:39479271-39517432 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035076
protein coding gene Chr9:35226618-35265950 (+)
PWK/PhJ MGP_PWKPhJ_G0033275
protein coding gene Chr9:34475488-34512018 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033109
protein coding gene Chr9:35424290-35462334 (+)
WSB/EiJ MGP_WSBEiJ_G0033685
protein coding gene Chr9:35044024-35082943 (+)



Homology
more
  • Human Ortholog
    MSANTD2, Myb/SANT DNA binding domain containing 2
  • Vertebrate Orthologs
    8
  • Human Ortholog
    MSANTD2, Myb/SANT DNA binding domain containing 2
    Orthology source: HGNC
  • Synonyms
    C11orf61
  • Links
    NCBI Gene ID: 79684
    neXtProt AC: NX_Q6P1R3
    UniProt: Q6P1R3

  • Chr Location
    11q24.2; chr11:124766492-124800879 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000042138 Ensembl Gene Model | MGI Sequence Detail 35307 C57BL/6J ±  kb
transcript ENSMUST00000048604 Ensembl | MGI Sequence Detail 2291 Not Applicable  
polypeptide ENSMUSP00000043329 Ensembl | MGI Sequence Detail 559 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
Other
Accession IDs
less
MGI:1920016, MGI:1926120
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/07/2019
MGI 6.14
The Jackson Laboratory