About   Help   FAQ
Ttc13 Gene Detail
Summary
  • Symbol
    Ttc13
  • Name
    tetratricopeptide repeat domain 13
  • Synonyms
    MGC:28881
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384573
    NCBI Gene: 234875
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:124671332-124721983 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 72.81 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    675 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2384573
protein coding gene Chr8:124671327-124722011 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034275
protein coding gene Chr8:128371203-128426281 (-)
A/J MGP_AJ_G0034255
protein coding gene Chr8:123055261-123105753 (-)
AKR/J MGP_AKRJ_G0034182
protein coding gene Chr8:126593205-126650208 (-)
BALB/cJ MGP_BALBcJ_G0034248
protein coding gene Chr8:123240038-123290461 (-)
C3H/HeJ MGP_C3HHeJ_G0033959
protein coding gene Chr8:127243771-127297706 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034768
protein coding gene Chr8:132662135-132712640 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031709
protein coding gene Chr8:115819610-115868394 (-)
CAST/EiJ MGP_CASTEiJ_G0033286
protein coding gene Chr8:127367639-127421700 (-)
CBA/J MGP_CBAJ_G0033932
protein coding gene Chr8:137525525-137582059 (-)
DBA/2J MGP_DBA2J_G0034088
protein coding gene Chr8:122211218-122261421 (-)
FVB/NJ MGP_FVBNJ_G0034032
protein coding gene Chr8:121381480-121435705 (-)
LP/J MGP_LPJ_G0034177
protein coding gene Chr8:128539041-128590360 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034079
protein coding gene Chr8:139604700-139660457 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034787
protein coding gene Chr8:126837912-126890526 (-)
PWK/PhJ MGP_PWKPhJ_G0032988
protein coding gene Chr8:121974560-122024796 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032827
protein coding gene Chr8:125470588-125519776 (-)
WSB/EiJ MGP_WSBEiJ_G0033403
protein coding gene Chr8:127556660-127607790 (-)



Homology
more
  • Human Ortholog
    TTC13, tetratricopeptide repeat domain 13
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TTC13, tetratricopeptide repeat domain 13
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 79573
    neXtProt AC: NX_Q8NBP0
    UniProt: Q8NBP0

  • Chr Location
    1q42.2; chr1:230906241-230978872 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 11569
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: TTC13
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000037300 Ensembl Gene Model | MGI Sequence Detail 50652 C57BL/6J ±  kb
transcript ENSMUST00000214828 Ensembl | MGI Sequence Detail 3301 Not Applicable  
polypeptide ENSMUSP00000149848 Ensembl | MGI Sequence Detail 844 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    9 Sequences
  • InterPro Domains
    IPR011990 Tetratricopeptide-like helical domain superfamily
    IPR019734 Tetratricopeptide repeat
    IPR001440 Tetratricopeptide repeat 1
    IPR013026 Tetratricopeptide repeat-containing domain
Molecular
Reagents
less
  • All nucleic 63
    cDNA 63

    Microarray probesets 5
References
more
  • Summaries
    All 24
    Phenotypes 5
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
02/16/2021
MGI 6.16
The Jackson Laboratory