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Ttc13 Gene Detail
Summary
  • Symbol
    Ttc13
  • Name
    tetratricopeptide repeat domain 13
  • Synonyms
    MGC:28881
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384573
    NCBI Gene: 234875
Location & Maps
more
  • Sequence Map
    Chr8:124671335-124721983 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      50649 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 72.81 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    TTC13, tetratricopeptide repeat domain 13
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TTC13, tetratricopeptide repeat domain 13
    Orthology source: HomoloGene
  • Links
    NCBI Gene ID: 79573
    neXtProt AC: NX_Q8NBP0

  • Chr Location
    1q42.2; chr1:230906241-230978872 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 11569
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: TTC13
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    8
  • Gene trapped
    6
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000031037 VEGA Gene Model | MGI Sequence Detail 50649 C57BL/6J ±  kb
transcript OTTMUST00000076890 VEGA | MGI Sequence Detail 3277 Not Applicable  
polypeptide OTTMUSP00000040540 VEGA | MGI Sequence Detail 835 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    675 from dbSNP Build 142
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR011990 Tetratricopeptide-like helical domain
    IPR019734 Tetratricopeptide repeat
    IPR001440 Tetratricopeptide repeat 1
    IPR013026 Tetratricopeptide repeat-containing domain
Molecular
Reagents
less
  • All nucleic 62
    cDNA 62

    Microarray probesets 5
References
more
  • Summaries
    All 24
    Phenotypes 5
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory