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Usp11
Gene Detail
 Symbol
Name
ID
Usp11
ubiquitin specific peptidase 11
MGI:2384312
Synonyms 6230415D12Rik, MGC:6649
Feature Type protein coding gene
Genetic Map
Chromosome X
16.20 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
ChrX:20703906-20720539 bp, + strand
From VEGA annotation of GRCm38

  16634 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:31252  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

Protein SuperFamily: ubiquitin C-terminal hydrolase Ubp12
Gene Tree: Usp11

Human
homologs
Human Homolog USP11, ubiquitin specific peptidase 11
NCBI Gene ID 8237
neXtProt AC  NX_P51784
Human Synonyms  UHX1
Human Chr (Location)  Xp11.23; chrX:47232915-47248328 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(10) : Gene trapped(9) Targeted(1)
Interactions
Usp11 interacts with 143 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process protein deubiquitination, proteolysis, ...
Component cytoplasm, nucleus
Function cysteine-type peptidase activity, hydrolase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (37)    Tissues (3)    Images (25)
Theiler Stages: 23
Assay TypeResults
RNA in situ 37
cDNA source data(73)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(74) cDNA(74)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000017158 (Evidence)
Ensembl Gene ModelENSMUSG00000031066 (Evidence)
Entrez Gene236733 (Evidence)
UniGene34489
DFCITC1575132, TC1658288
DoTSDT.111033494, DT.486472, DT.94127602
NIA Mouse Gene IndexU019751
EC3.4.19.12
Consensus CDS ProjectCCDS53015.1
International Mouse Knockout Project StatusUsp11
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017158 VEGA Gene Model | MGI Sequence Detail 16634 C57BL/6J ±  kb
transcript OTTMUST00000041524 VEGA | MGI Sequence Detail 3467 Not Applicable 
polypeptide OTTMUSP00000018659 VEGA | MGI Sequence Detail 921 Not Applicable 

For the selected sequences
All sequences(43) RefSeq(6) UniProt(6)
Polymorphisms SNPs within 2kb(80 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
InterPro IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
InterPro IPR006615 Peptidase C19, ubiquitin-specific peptidase, DUSP domain
Protein Ontology PR:000017147 ubiquitin carboxyl-terminal hydrolase 11
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)
Other
accession IDs
MGI:2444517

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory