Rbm10
Gene Detail

Symbol Name ID

Rbm10 RNA binding motif protein 10 MGI:2384310

Synonyms

E430039K10Rik, MGC:7826

Feature Type

protein coding gene

Genetic Map

Chromosome X

16.11 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

ChrX:20617503-20650901 bp, + strand From VEGA annotation of GRCm38   33399 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:31330  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Rbm10

Human homologs

Human Homolog		RBM10, RNA binding motif protein 10
NCBI Gene ID		8241
neXtProt AC		NX_P98175
Human Synonyms		DXS8237E, GPATC9, GPATCH9, S1-1, TARPS, ZRANB5
Human Chr (Location)		Xp11.23; chrX:47004617-47046214 (+)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human RBM10

Alleles and phenotypes

All alleles(17) : Targeted(1) Gene trapped(16)
Phenotype Images(8)

Gene Ontology (GO) classifications

All GO classifications: (12 annotations)

Process	3'-UTR-mediated mRNA stabilization, negative regulation of cell proliferation, ...
Component	nucleus
Function	metal ion binding, nucleic acid binding, ...

External Resources: FuncBase

Expression

Literature Summary: (3 records)
Data Summary: Results (39)    Tissues (37)    Images (3)
Theiler Stages: 2, 3, 4, 5, 21, 28

Assay Type	Results
RNA in situ	22
RT-PCR	17

cDNA source data(11)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(13) cDNA(11) Primer pair(2)
Microarray probesets(5)

Other database links

VEGA Gene Model	OTTMUSG00000017091 (Evidence)
Ensembl Gene Model	ENSMUSG00000031060 (Evidence)
Entrez Gene	236732 (Evidence)
DFCI	TC1572735, TC1590960
Consensus CDS Project	CCDS40885.1, CCDS53013.1, CCDS53014.1
International Mouse Knockout Project Status	Rbm10

Sequences

Length	Strain/Species
genomic	OTTMUSG00000017091	VEGA Gene Model | MGI Sequence Detail	33399	C57BL/6J
transcript	OTTMUST00000041388	VEGA | MGI Sequence Detail	3564	Not Applicable
polypeptide	OTTMUSP00000018569	VEGA | MGI Sequence Detail	930	Not Applicable

All sequences(55) RefSeq(6) UniProt(3)

Polymorphisms

SNPs(39 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR000467	G-patch domain
InterPro	IPR012677	Nucleotide-binding, alpha-beta plait
InterPro	IPR000504	RNA recognition motif domain
InterPro	IPR007087	Zinc finger, C2H2
InterPro	IPR015880	Zinc finger, C2H2-like
InterPro	IPR001876	Zinc finger, RanBP2-type
Protein Ontology	PR:000013783	RNA-binding protein 10

References

(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(39)

Other accession IDs

MGI:2443912