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Rbm10
Gene Detail
Symbol

Name
ID
Rbm10
RNA binding motif protein 10
MGI:2384310
Synonyms
E430039K10Rik, MGC:7826
Feature Type
protein coding gene
Genetic Map
Chromosome X
16.11 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
ChrX:20617503-20650901 bp, + strand
From VEGA annotation of GRCm38

  33399 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:31330  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

Gene Tree: Rbm10

Human
homologs
Human Homolog RBM10, RNA binding motif protein 10
NCBI Gene ID 8241
neXtProt AC  NX_P98175
Human Synonyms  DXS8237E, GPATC9, GPATCH9, S1-1, TARPS, ZRANB5
Human Chr (Location)  Xp11.23; chrX:47145218-47186815 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human RBM10
Mutations,
alleles, and
phenotypes
All mutations/alleles(17) : Gene trapped(16) Targeted(1)
Incidental mutations (data from Mutagenetix )
 
Male chimeras hemizygous for a gene trapped allele appear normal at E8.5.
 
Phenotype Images(8)
Interactions
Rbm10 interacts with 53 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (17 annotations)
Process 3'-UTR-mediated mRNA stabilization, negative regulation of cell proliferation, ...
Component nucleus
Function identical protein binding, metal ion binding, ...
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (32)    Tissues (32)    Images (3)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 22
RT-PCR 10
cDNA source data(11)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(13) cDNA(11) Primer pair(2)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000017091 (Evidence)
Ensembl Gene ModelENSMUSG00000031060 (Evidence)
Entrez Gene236732 (Evidence)
DFCITC1572735, TC1590960
Consensus CDS ProjectCCDS40885.1, CCDS53013.1, CCDS53014.1
International Mouse Knockout Project StatusRbm10
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017091 VEGA Gene Model | MGI Sequence Detail 33399 C57BL/6J ±  kb
transcript OTTMUST00000041388 VEGA | MGI Sequence Detail 3564 Not Applicable 
polypeptide OTTMUSP00000018569 VEGA | MGI Sequence Detail 930 Not Applicable 

For the selected sequences
All sequences(65) RefSeq(14) UniProt(5)
Polymorphisms
SNPs within 2kb(42 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000467 G-patch domain
InterPro IPR012677 Nucleotide-binding, alpha-beta plait
InterPro IPR000504 RNA recognition motif domain
InterPro IPR007087 Zinc finger, C2H2
InterPro IPR015880 Zinc finger, C2H2-like
InterPro IPR001876 Zinc finger, RanBP2-type
Protein Ontology PR:000013783 RNA-binding protein 10
References
(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:204486 Zheng S, et al., A broadly applicable high-throughput screening strategy identifies new regulators of Dlg4 (Psd-95) alternative splicing. Genome Res. 2013 Jun;23(6):998-1007
All references(40)
Other
accession IDs
MGI:2443912

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/21/2014
MGI 5.20
The Jackson Laboratory