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Ormdl1 Gene Detail
Summary
  • Symbol
    Ormdl1
  • Name
    ORM1-like 1 (S. cerevisiae)
  • Synonyms
    C730042F17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2181669
    NCBI Gene: 227102
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:53297095-53310245 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 26.99 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    86 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2181669
protein coding gene Chr1:53297095-53310309 (.)
129S1/SvImJ MGP_129S1SvImJ_G0016017
protein coding gene Chr1:52840672-52855640 (+)
A/J MGP_AJ_G0015999
protein coding gene Chr1:51059788-51069877 (+)
AKR/J MGP_AKRJ_G0015955
protein coding gene Chr1:52169437-52174289 (+)
BALB/cJ MGP_BALBcJ_G0015956
protein coding gene Chr1:50877368-50894276 (+)
C3H/HeJ MGP_C3HHeJ_G0015788
protein coding gene Chr1:52547751-52566014 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016407
protein coding gene Chr1:55018206-55033328 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014117
protein coding gene Chr1:40822470-40839113 (-)
CAST/EiJ MGP_CASTEiJ_G0015369
protein coding gene Chr1:52036144-52049623 (+)
CBA/J MGP_CBAJ_G0015759
protein coding gene Chr1:56525723-56536845 (+)
DBA/2J MGP_DBA2J_G0015860
protein coding gene Chr1:50326445-50342594 (+)
FVB/NJ MGP_FVBNJ_G0015862
protein coding gene Chr1:49783494-49797311 (+)
LP/J MGP_LPJ_G0015931
protein coding gene Chr1:53263367-53276758 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015882
protein coding gene Chr1:59596011-59610991 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016455
protein coding gene Chr1:52276465-52292535 (+)
PWK/PhJ MGP_PWKPhJ_G0015155
protein coding gene Chr1:50164174-50169006 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014935
protein coding gene Chr1:51944634-51950378 (+)
WSB/EiJ MGP_WSBEiJ_G0015432
protein coding gene Chr1:52087529-52092381 (+)



Homology
more
  • Human Ortholog
    ORMDL1, ORMDL sphingolipid biosynthesis regulator 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ORMDL1, ORMDL sphingolipid biosynthesis regulator 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 94101
    neXtProt AC: NX_Q9P0S3
    UniProt: Q9P0S3

  • Chr Location
    2q32.2; chr2:189766149-189784371 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 227102 NCBI Gene Model | MGI Sequence Detail 13151 C57BL/6J ±  kb
transcript NM_145517 RefSeq | MGI Sequence Detail 1849 C57BL/6  
polypeptide Q921I0 UniProt | EBI | MGI Sequence Detail 153 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 70
    cDNA 70

    Microarray probesets 3
Other
Accession IDs
less
MGI:2443339
References
more
  • Summaries
    All 29
    Gene Ontology 6
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:221146 Siow D, et al., ORMDL/serine palmitoyltransferase stoichiometry determines effects of ORMDL3 expression on sphingolipid biosynthesis. J Lipid Res. 2015 Apr;56(4):898-908

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory