About   Help   FAQ
Take the Alliance for Genomic Resources User Survey
Xrra1 Gene Detail
Summary
  • Symbol
    Xrra1
  • Name
    X-ray radiation resistance associated 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2181647
    NCBI Gene: 446101
Location & Maps
more
  • Sequence Map
    Chr7:99859116-99917822 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      58707 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 54.15 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    XRRA1, X-ray radiation resistance associated 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    XRRA1, X-ray radiation resistance associated 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 143570
    neXtProt AC: NX_Q6P2D8

  • Chr Location
    11q13.4; chr11:74840910-74949187 (-)  GRCh38.p2
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Xrra1
  • Incidental Mutations
    Mutagenetix , APF
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
    5
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000059072 VEGA Gene Model | MGI Sequence Detail 58707 C57BL/6J ±  kb
transcript OTTMUST00000144908 VEGA | MGI Sequence Detail 2731 Not Applicable  
polypeptide OTTMUSP00000075502 VEGA | MGI Sequence Detail 786 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    576 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000017513 X-ray radiation resistance-associated protein 1
  • InterPro Domains
    IPR001611 Leucine-rich repeat
    IPR032675 Leucine-rich repeat domain, L domain-like
    IPR003591 Leucine-rich repeat, typical subtype
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
Other
Accession IDs
less
MGI:2141964
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 10
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support. 		last database update
09/13/2016
MGI 6.05 		The Jackson Laboratory