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Atp13a1 Gene Detail
Summary
  • Symbol
    Atp13a1
  • Name
    ATPase type 13A1
  • Synonyms
    Atp13a, catp, Cgi152
  • Feature Type
    protein coding gene
  • IDs
    MGI:2180801
    NCBI Gene: 170759
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:69791163-69807749 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 33.88 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    74 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2180801
protein coding gene Chr8:69791163-69807749 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033676
protein coding gene Chr8:70004409-70020936 (+)
A/J MGP_AJ_G0033659
protein coding gene Chr8:67167871-67184599 (+)
AKR/J MGP_AKRJ_G0033584
protein coding gene Chr8:69071136-69087501 (+)
BALB/cJ MGP_BALBcJ_G0033655
protein coding gene Chr8:67391045-67407572 (+)
C3H/HeJ MGP_C3HHeJ_G0033365
protein coding gene Chr8:69726965-69743384 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034172
protein coding gene Chr8:72665794-72682387 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031116
protein coding gene Chr8:61994252-62011153 (+)
CAST/EiJ MGP_CASTEiJ_G0032690
protein coding gene Chr8:69193659-69210203 (+)
CBA/J MGP_CBAJ_G0033343
protein coding gene Chr8:75322445-75339184 (+)
DBA/2J MGP_DBA2J_G0033497
protein coding gene Chr8:66894420-66910892 (+)
FVB/NJ MGP_FVBNJ_G0033438
protein coding gene Chr8:65987304-66004007 (+)
LP/J MGP_LPJ_G0033584
protein coding gene Chr8:70066823-70083372 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033482
protein coding gene Chr8:77979649-77996226 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034190
protein coding gene Chr8:69252113-69269617 (+)
PWK/PhJ MGP_PWKPhJ_G0032398
protein coding gene Chr8:66176770-66193536 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032234
protein coding gene Chr8:68234586-68250978 (+)
WSB/EiJ MGP_WSBEiJ_G0032805
protein coding gene Chr8:69620475-69636936 (+)



Homology
more
  • Human Ortholog
    ATP13A1, ATPase 13A1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ATP13A1, ATPase 13A1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ATP13A, CGI-152
  • Links
    NCBI Gene ID: 57130
    neXtProt AC: NX_Q9HD20
    UniProt: Q9HD20

  • Chr Location
    19p13.11; chr19:19645198-19663694 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 170759 NCBI Gene Model | MGI Sequence Detail 16587 C57BL/6J ±  kb
transcript NM_133224 RefSeq | MGI Sequence Detail 3915 C57BL/6  
polypeptide Q9EPE9 UniProt | EBI | MGI Sequence Detail 1200 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 127
    cDNA 126
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 27
    Gene Ontology 3
    Phenotypes 4
  • Earliest
    J:92813 Schultheis PJ, et al., Characterization of the P(5) subfamily of P-type transport ATPases in mice. Biochem Biophys Res Commun. 2004 Oct 22;323(3):731-8
  • Latest
    J:262609 Dirr ER, et al., Exacerbation of sensorimotor dysfunction in mice deficient in Atp13a2 and overexpressing human wildtype alpha-synuclein. Behav Brain Res. 2018 May 2;343:41-49

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/11/2019
MGI 6.14
The Jackson Laboratory