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Klra17
Gene Detail
 Symbol
Name
ID
Klra17
killer cell lectin-like receptor, subfamily A, member 17
MGI:2180674
Synonyms Ly49Q, Ly-49Q, Ly49q1
Feature Type protein coding gene
Genetic Map
Chromosome 6
63.44 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr6:129831164-129876672 bp, - strand
From VEGA annotation of GRCm38

  45509 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Protein SuperFamily: natural killer receptor Ly49
Gene Tree: Klra17
Alleles
and
phenotypes
All alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a knock-in allele exhibit reduced plasmacytoid dendritic cell number and function.
 
Gene Ontology
(GO)
classifications
All GO classifications: (2 annotations)
Component integral component of membrane, membrane
External Resources: FuncBase
Expression
cDNA source data(2)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(2) cDNA(2)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000026518 (Evidence)
Ensembl Gene ModelENSMUSG00000014543 (Evidence)
Entrez Gene170733 (Evidence)
UniGene155514
DoTSDT.103545145, DT.110491195, DT.110491197, DT.110491198
NIA Mouse Gene IndexU027925
Consensus CDS ProjectCCDS39664.1
International Mouse Knockout Project StatusKlra17
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026518 VEGA Gene Model | MGI Sequence Detail 45509 C57BL/6J ±  kb
transcript OTTMUST00000065596 VEGA | MGI Sequence Detail 1167 Not Applicable 
polypeptide OTTMUSP00000032710 VEGA | MGI Sequence Detail 274 Not Applicable 

For the selected sequences
All sequences(50) RefSeq(6) UniProt(8)
Polymorphisms SNPs within 2kb(566 from dbSNP Build 137)    SNPs within 2kb including multiple locations(568)
Protein-related
information
ResourceIDDescription
InterPro IPR001304 C-type lectin
InterPro IPR016187 C-type lectin fold
InterPro IPR016186 C-type lectin-like
InterPro IPR013600 Ly49-like N-terminal
References (Earliest) J:75169 Makrigiannis AP, et al., A BAC Contig Map of the Ly49 Gene Cluster in 129 Mice Reveals Extensive Differences in Gene Content Relative to C57BL/6 Mice. Genomics. 2002 Mar;79(3):437-44
(Latest) J:194900 Rahim MM, et al., Ly49Q Positively Regulates Type I IFN Production by Plasmacytoid Dendritic Cells in an Immunoreceptor Tyrosine-Based Inhibitory Motif-Dependent Manner. J Immunol. 2013 Apr 15;190(8):3994-4004
All references(29)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory