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Pnma3 Gene Detail
Summary
  • Symbol
    Pnma3
  • Name
    paraneoplastic antigen MA3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2180565
    NCBI Gene: 245468
  • Alliance
Location &
Maps
more
  • Sequence Map
    ChrX:73064787-73068191 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 37.29 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    17 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2180565
protein coding gene ChrX:73064787-73068191 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035799
protein coding gene ChrX:68763535-68766965 (+)
A/J MGP_AJ_G0035783
protein coding gene ChrX:68958777-68962214 (+)
AKR/J MGP_AKRJ_G0035705
protein coding gene ChrX:70800669-70804069 (+)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0035473
protein coding gene ChrX:69262931-69266436 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036300
protein coding gene ChrX:70856774-70861322 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0035601
protein coding gene ChrX:68450026-68453158 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0035690
protein coding gene ChrX:69616923-69619968 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035587
protein coding gene ChrX:75397479-75400900 (+)
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0034465
protein coding gene ChrX:52575255-52580585 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034300
protein coding gene ChrX:55524166-55529830 (+)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    PNMA3, PNMA family member 3
  • Vertebrate Orthologs
    5
  • Human Ortholog
    PNMA3, PNMA family member 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    MA3, MA5
  • Links
    NCBI Gene ID: 29944
    neXtProt AC: NX_Q9UL41
    UniProt: Q9UL41

  • Chr Location
    Xq28; chrX:153056343-153060467 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 245468 NCBI Gene Model | MGI Sequence Detail 3405 C57BL/6J ±  kb
transcript NM_153169 RefSeq | MGI Sequence Detail 3442 Not Specified  
polypeptide Q8JZW8 UniProt | EBI | MGI Sequence Detail 466 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 5
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:99307 Raefski AS, et al., Identification of a cluster of X-linked imprinted genes in mice. Nat Genet. 2005 Jun;37(6):620-4
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/30/2020
MGI 6.15
The Jackson Laboratory