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Bivm Gene Detail
Summary
  • Symbol
    Bivm
  • Name
    basic, immunoglobulin-like variable motif containing
  • Feature Type
    protein coding gene
  • IDs
    MGI:2179809
    NCBI Gene: 246229
Location & Maps
more
  • Sequence Map
    Chr1:44118957-44144770 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      25814 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 23.54 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    BIVM, basic, immunoglobulin-like variable motif containing
  • Vertebrate Orthologs
    9
  • Human Ortholog
    BIVM, basic, immunoglobulin-like variable motif containing
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 54841
    neXtProt AC: NX_Q86UB2

  • Chr Location
    13q33.1; chr13:102799049-102841538 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 9783
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 frog, western clawed
  • HCOP
    human homology predictions: BIVM
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Targeted
    3
  • Genomic Mutations
    1 involving Bivm
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023025 VEGA Gene Model | MGI Sequence Detail 25814 C57BL/6J ±  kb
transcript OTTMUST00000055464 VEGA | MGI Sequence Detail 3313 Not Applicable  
polypeptide OTTMUSP00000026563 VEGA | MGI Sequence Detail 502 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    234 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000032668 basic immunoglobulin-like variable motif-containing protein
Molecular
Reagents
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  • All nucleic 21
    cDNA 21

    Microarray probesets 3
Other
Accession IDs
less
MGI:2138369
References
more
  • Summaries
    All 23
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:76625 Yoder JA, et al., BIVM, a Novel Gene Widely Distributed among Deuterostomes, Shares a Core Sequence with an Unusual Gene in Giardia lamblia. Genomics. 2002 Jun;79(6):750-5
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory