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Apobr Gene Detail
Summary
  • Symbol
    Apobr
  • Name
    apolipoprotein B receptor
  • Synonyms
    Apob48r, Apob-48r
  • Feature Type
    protein coding gene
  • IDs
    MGI:2176230
    NCBI Gene: 171504
Location & Maps
more
  • Sequence Map
    Chr7:126584942-126589112 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      4171 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 69.17 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    APOBR, apolipoprotein B receptor
  • Vertebrate Orthologs
    7
  • Human Ortholog
    APOBR, apolipoprotein B receptor
    Orthology source: HomoloGene, HGNC
  • Synonyms
    APOB100R, APOB48R
  • Links
    NCBI Gene ID: 55911
    neXtProt AC: NX_Q0VD83

  • Chr Location
    16p12.1; chr16:28494649-28498970 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    11
  • Gene trapped
    10
  • Targeted
    1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029445 VEGA Gene Model | MGI Sequence Detail 4171 C57BL/6J ±  kb
transcript OTTMUST00000072962 VEGA | MGI Sequence Detail 3685 Not Applicable  
polypeptide OTTMUSP00000037685 VEGA | MGI Sequence Detail 942 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    69 from dbSNP Build 142
  • PCR
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 36
    cDNA 35
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 27
    Gene Ontology 4
    Phenotypes 4
  • Earliest
    J:78921 Brown ML, et al., The murine macrophage apoB-48 receptor gene (Apob-48r): homology to the human receptor. J Lipid Res. 2002 Aug;43(8):1181-91
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory