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Vmn1r200 Gene Detail
Summary
  • Symbol
    Vmn1r200
  • Name
    vomeronasal 1 receptor 200
  • Synonyms
    V1rh3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2159660
    NCBI Gene: 171246
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr13:22395029-22395967 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 8.66 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    8 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2159660
protein coding gene Chr13:22390373-22400052 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020320
protein coding gene Chr13:19728401-19729339 (+)
A/J MGP_AJ_G0020278
protein coding gene Chr13:19317595-19318533 (+)
AKR/J MGP_AKRJ_G0020248
protein coding gene Chr13:19618967-19623884 (+)
BALB/cJ MGP_BALBcJ_G0020265
protein coding gene Chr13:19324674-19325612 (+)
C3H/HeJ MGP_C3HHeJ_G0020072
protein coding gene Chr13:19691048-19691986 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020706
protein coding gene Chr13:20427814-20428752 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017613
protein coding gene Chr12:7717271-7718280 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0020024
protein coding gene Chr13:21121828-21122766 (+)
DBA/2J MGP_DBA2J_G0020150
protein coding gene Chr13:18925140-18926078 (+)
FVB/NJ MGP_FVBNJ_G0020135
protein coding gene Chr13:18556990-18557928 (+)
LP/J MGP_LPJ_G0020225
protein coding gene Chr13:19952994-19953932 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020168
protein coding gene Chr13:21475342-21476280 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020738
protein coding gene Chr13:19406627-19407565 (+)
PWK/PhJ MGP_PWKPhJ_G0019355
protein coding gene Chr13:19033010-19033993 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0019656
protein coding gene Chr13:19541652-19542840 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 171246 NCBI Gene Model | MGI Sequence Detail 939 C57BL/6J ±  kb
transcript NM_134212 RefSeq | MGI Sequence Detail 939 Not Specified  
polypeptide NP_598973 RefSeq | MGI Sequence Detail 312 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR004072 Vomeronasal receptor, type 1
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory