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Vmn1r235 Gene Detail
Summary
  • Symbol
    Vmn1r235
  • Name
    vomeronasal 1 receptor 235
  • Synonyms
    V1rf2
  • Feature Type
    protein coding gene
  • IDs
    MGI:2159636
    NCBI Gene: 171233
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr17:21260427-21262863 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 11.40 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2159636
protein coding gene Chr17:21260427-21262863 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023224
protein coding gene Chr17:19998220-20000683 (+)
A/J MGP_AJ_G0023191
protein coding gene Chr17:19231641-19234104 (+)
AKR/J MGP_AKRJ_G0023160
protein coding gene Chr17:19272280-19274716 (+)
BALB/cJ MGP_BALBcJ_G0023189
protein coding gene Chr17:19431526-19433989 (+)
C3H/HeJ MGP_C3HHeJ_G0022950
protein coding gene Chr17:19660339-19662775 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023632
protein coding gene Chr17:20632359-20634795 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028456
protein coding gene Chr6:58387231-58389663 (+)
CAST/EiJ MGP_CASTEiJ_G0022463
protein coding gene Chr17:19379313-19381752 (+)
CBA/J MGP_CBAJ_G0022925
protein coding gene Chr17:21342551-21344987 (+)
DBA/2J MGP_DBA2J_G0023059
protein coding gene Chr17:18883168-18885631 (+)
FVB/NJ MGP_FVBNJ_G0023025
protein coding gene Chr17:18674260-18676696 (+)
LP/J MGP_LPJ_G0023136
protein coding gene Chr17:19976247-19978710 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023045
protein coding gene Chr17:21249072-21251508 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023672
protein coding gene Chr17:19655305-19657768 (+)
PWK/PhJ MGP_PWKPhJ_G0022210
protein coding gene Chr17:17776063-17778501 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022032
protein coding gene Chr17:17704239-17706254 (+)
WSB/EiJ MGP_WSBEiJ_G0022523
protein coding gene Chr17:19747644-19750082 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 171233 NCBI Gene Model | MGI Sequence Detail 2437 C57BL/6J ±  kb
transcript NM_134199 RefSeq | MGI Sequence Detail 1781 Not Specified  
polypeptide NP_598960 RefSeq | MGI Sequence Detail 328 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR004072 Vomeronasal receptor, type 1
Molecular
Reagents
less
  • All nucleic 2
    Genomic 2

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:74518 Rodriguez I, et al., Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Nat Neurosci. 2002 Feb;5(2):134-40
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory