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Vmn1r9 Gene Detail
Summary
  • Symbol
    Vmn1r9
  • Name
    vomeronasal 1 receptor 9
  • Synonyms
    V1rc30
  • Feature Type
    protein coding gene
  • IDs
    MGI:2159466
    NCBI Gene: 171203
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:57070895-57071945 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 27.81 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    41 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2159466
protein coding gene Chr6:57066787-57074906 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030789
protein coding gene Chr6:56589575-56597927 (+)
A/J MGP_AJ_G0030758
protein coding gene Chr6:53889559-54000695 (+)
AKR/J MGP_AKRJ_G0030685
protein coding gene Chr6:55696803-55789226 (+)
BALB/cJ MGP_BALBcJ_G0030770
protein coding gene Chr6:54305251-54402132 (+)
C3H/HeJ MGP_C3HHeJ_G0030483
protein coding gene Chr6:55771788-55912311 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031225
protein coding gene Chr6:57878005-57879189 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0030457
protein coding gene Chr6:60168366-60269291 (+)
DBA/2J MGP_DBA2J_G0030607
protein coding gene Chr6:53782827-53862283 (+)
FVB/NJ MGP_FVBNJ_G0030558
protein coding gene Chr6:53360139-53361321 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0030593
protein coding gene Chr6:62642320-62645062 (+)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0029962
protein coding gene Chr6:55790563-55793787 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 171203 NCBI Gene Model | MGI Sequence Detail 1051 C57BL/6J ±  kb
transcript NM_134185 RefSeq | MGI Sequence Detail 1051 Not Specified  
polypeptide NP_598946 RefSeq | MGI Sequence Detail 299 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR004072 Vomeronasal receptor, type 1
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Gene Ontology 2
  • Earliest
    J:74518 Rodriguez I, et al., Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Nat Neurosci. 2002 Feb;5(2):134-40
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/11/2019
MGI 6.14
The Jackson Laboratory