About   Help   FAQ
Wdr18 Gene Detail
Summary
  • Symbol
    Wdr18
  • Name
    WD repeat domain 18
  • Synonyms
    2310012I10Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2158400
    NCBI Gene: 216156
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:79959989-79969247 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 39.72 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2158400
protein coding gene Chr10:79959989-79970203 (.)
129S1/SvImJ MGP_129S1SvImJ_G0017473
protein coding gene Chr10:80531521-80540617 (+)
A/J MGP_AJ_G0017451
protein coding gene Chr10:77716406-77725440 (+)
AKR/J MGP_AKRJ_G0017412
protein coding gene Chr10:79833610-79842936 (+)
BALB/cJ MGP_BALBcJ_G0017413
protein coding gene Chr10:77943465-77952526 (+)
C3H/HeJ MGP_C3HHeJ_G0017236
protein coding gene Chr10:79939969-79949020 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017867
protein coding gene Chr10:83313449-83322494 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015555
protein coding gene Chr10:73941728-73950966 (+)
CAST/EiJ MGP_CASTEiJ_G0016803
protein coding gene Chr10:80135777-80144882 (+)
CBA/J MGP_CBAJ_G0017208
protein coding gene Chr10:86540976-86550006 (+)
DBA/2J MGP_DBA2J_G0017314
protein coding gene Chr10:76932771-76941865 (+)
FVB/NJ MGP_FVBNJ_G0017308
protein coding gene Chr10:76111471-76121255 (+)
LP/J MGP_LPJ_G0017385
protein coding gene Chr10:81008661-81017571 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017334
protein coding gene Chr10:88504246-88513340 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017908
protein coding gene Chr10:79822164-79832366 (+)
PWK/PhJ MGP_PWKPhJ_G0016584
protein coding gene Chr10:76798807-76807843 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016373
protein coding gene Chr10:78794095-78803111 (+)
WSB/EiJ MGP_WSBEiJ_G0016863
protein coding gene Chr10:79845989-79855029 (+)



Homology
more
  • Human Ortholog
    WDR18, WD repeat domain 18
  • Vertebrate Orthologs
    10
  • Human Ortholog
    WDR18, WD repeat domain 18
    Orthology source: HomoloGene, HGNC
  • Synonyms
    Ipi3, R32184_1
  • Links
    NCBI Gene ID: 57418
    neXtProt AC: NX_Q9BV38
    UniProt: Q9BV38

  • Chr Location
    19p13.3; chr19:982980-994570 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 32573
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: WDR18
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 216156 NCBI Gene Model | MGI Sequence Detail 9259 C57BL/6J ±  kb
transcript NM_175450 RefSeq | MGI Sequence Detail 2954 C57BL/6  
polypeptide Q4VBE8 UniProt | EBI | MGI Sequence Detail 431 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 125
    Genomic 1
    cDNA 123
    Other 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:1923697, MGI:2143769, MGI:2143813
References
more
  • Summaries
    All 37
    Gene Ontology 3
    Phenotypes 11
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/13/2018
MGI 6.13
The Jackson Laboratory