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Cd209e
Gene Detail
 Symbol
Name
ID
Cd209e
CD209e antigen
MGI:2157948
Synonyms mSIGNR4, SIGNR4
Feature Type protein coding gene
Genetic Map
Chromosome 8
1.92 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr8:3847965-3854309 bp, - strand
From VEGA annotation of GRCm38

  6345 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:128353  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque

Gene Tree: Cd209e

Human
homologs
Human Homolog CD209, CD209 molecule
NCBI Gene ID 30835
neXtProt AC  NX_Q9NNX6
Human Synonyms  CDSIGN, CLEC4L, DC-SIGN, DC-SIGN1
Human Chr (Location)  19p13; chr19:7739993-7747611 (-)  GRCh38
Disease Associations  (3) Diseases Associated with Human CD209
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cd209e interacts with 167 markers (Mir7-1, Mir7b, Mir15a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process endocytosis
Component extracellular vesicular exosome, integral component of membrane, ...
Function carbohydrate binding, mannose binding
External Resources: FuncBase
Expression
cDNA source data(4)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(5) Genomic(1) cDNA(4)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000027102 (Evidence)
Ensembl Gene ModelENSMUSG00000040197 (Evidence)
Entrez Gene170780 (Evidence)
UniGene52281
DFCITC1588590
DoTSDT.40184743
NIA Mouse Gene IndexU029545
Consensus CDS ProjectCCDS22074.1
International Mouse Knockout Project StatusCd209e
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027102 VEGA Gene Model | MGI Sequence Detail 6345 C57BL/6J ±  kb
transcript OTTMUST00000067043 VEGA | MGI Sequence Detail 1802 Not Applicable 
polypeptide OTTMUSP00000033681 VEGA | MGI Sequence Detail 208 Not Applicable 

For the selected sequences
All sequences(21) RefSeq(2) UniProt(3)
Polymorphisms SNPs within 2kb(46 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001304 C-type lectin
InterPro IPR018378 C-type lectin, conserved site
InterPro IPR016187 C-type lectin fold
InterPro IPR016186 C-type lectin-like
Protein Ontology PR:000006175 CD209 molecule-like protein E
References (Earliest) J:72165 Park CG, et al., Five mouse homologues of the human dendritic cell C-type lectin, DC-SIGN. Int Immunol. 2001 Oct;13(10):1283-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(25)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory