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Cd209d
Gene Detail
 Symbol
Name
ID
Cd209d
CD209d antigen
MGI:2157947
Synonyms mSIGNR3, SIGNR3, SIGN-R3
Feature Type protein coding gene
Genetic Map
Chromosome 8
1.92 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr8:3871824-3878499 bp, - strand
From NCBI annotation of GRCm38

  6676 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8603  Vertebrate Homology Class
1 mouse; 1 rat; 1 chimpanzee

Gene Tree: Cd209d

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a knock-out allele exhibit normal susceptibility to bacterial infection.
 
Interactions
Cd209d interacts with 24 markers (Mir30b, Mir192, Mir344, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process defense response to bacterium, endocytosis, ...
Component integral component of membrane, membrane
Function carbohydrate binding, mannose binding, ...
External Resources: FuncBase
Expression
cDNA source data(6)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(8) Genomic(1) cDNA(6) Other(1)
Microarray probesets(2)
Other database
links
Ensembl Gene ModelENSMUSG00000031495 (Evidence)
Entrez Gene170779 (Evidence)
UniGene111026
DFCITC1588376
DoTSDT.485085, DT.97406774
NIA Mouse Gene IndexU029546
Consensus CDS ProjectCCDS22075.1
International Mouse Knockout Project StatusCd209d
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 170779 NCBI Gene Model | MGI Sequence Detail 6676 C57BL/6J ±  kb
transcript NM_130904 RefSeq | MGI Sequence Detail 880 C57BL/6 
polypeptide Q91ZW8 UniProt | EBI | MGI Sequence Detail 237 Not Applicable 

For the selected sequences
All sequences(21) RefSeq(2) UniProt(2)
Polymorphisms SNPs within 2kb(37 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001304 C-type lectin
InterPro IPR018378 C-type lectin, conserved site
InterPro IPR016187 C-type lectin fold
InterPro IPR016186 C-type lectin-like
Protein Ontology PR:000006174 CD209 molecule-like protein D
Graphical View of Protein Domain Structure
References (Earliest) J:72165 Park CG, et al., Five mouse homologues of the human dendritic cell C-type lectin, DC-SIGN. Int Immunol. 2001 Oct;13(10):1283-90
(Latest) J:203147 Lefevre L, et al., The C-type lectin receptors dectin-1, MR, and SIGNR3 contribute both positively and negatively to the macrophage response to Leishmania infantum. Immunity. 2013 May 23;38(5):1038-49
All references(31)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory