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Cacng5 Gene Detail
Summary
  • Symbol
    Cacng5
  • Name
    calcium channel, voltage-dependent, gamma subunit 5
  • Feature Type
    protein coding gene
  • IDs
    MGI:2157946
    NCBI Gene: 140723
Location & Maps
more
  • Sequence Map
    Chr11:107874605-107915055 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      40451 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 70.44 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    CACNG5, calcium voltage-gated channel auxiliary subunit gamma 5
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CACNG5, calcium voltage-gated channel auxiliary subunit gamma 5
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 27091
    neXtProt AC: NX_Q9UF02

  • Chr Location
    17q24.2; chr17:66835117-66887296 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000003104 VEGA Gene Model | MGI Sequence Detail 40451 C57BL/6J ±  kb
transcript OTTMUST00000006393 VEGA | MGI Sequence Detail 3705 Not Applicable  
polypeptide OTTMUSP00000003009 VEGA | MGI Sequence Detail 275 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    407 from dbSNP Build 142
Protein
Information
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  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000004954 voltage-dependent calcium channel gamma-5 subunit
  • InterPro Domains
    IPR004031 PMP-22/EMP/MP20/Claudin superfamily
    IPR008369 Voltage-dependent calcium channel, gamma-5 subunit
    IPR008368 Voltage-dependent calcium channel, gamma subunit
Molecular
Reagents
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  • All nucleic 18
    cDNA 17
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 26
    Developmental Gene Expression 5
    Gene Ontology 4
  • Earliest
    J:61749 Burgess DL, et al., Identification of three novel Ca(2+) channel gamma subunit genes reveals molecular diversification by tandem and chromosome duplication. Genome Res. 1999 Dec;9(12):1204-13
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory