Dppa1
Gene Detail

Symbol Name ID

Dppa1 developmental pluripotency associated 1 MGI:2157522

Feature Type

protein coding gene

Genetic Map

Chromosome 11

28.02 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr11:46607772-46629261 bp, - strand From VEGA annotation of GRCm38   21490 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:52259  Vertebrate Homology Class
1 mouse; 1 rat

Gene Tree: Dppa1

Alleles and phenotypes

All alleles(2) : Targeted(2)

Gene Ontology (GO) classifications

All GO classifications: (3 annotations)

Process	biological_process
Component	cellular_component
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (3 records)
Data Summary: Results (79)    Tissues (31)    Images (13)
Theiler Stages: 2, 3, 19, 23, 28

Assay Type	Results
RNA in situ	43
RT-PCR	36

cDNA source data(17)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(19) Genomic(1) cDNA(17) Primer pair(1)
Microarray probesets(3)

Other database links

VEGA Gene Model	OTTMUSG00000005495 (Evidence)
Ensembl Gene Model	ENSMUSG00000064010 (Evidence)
Entrez Gene	347708 (Evidence)
UniGene	18119
DFCI	TC1586517, TC1644204
DoTS	DT.490746, DT.525277
NIA Mouse Gene Index	U032701
Consensus CDS Project	CCDS24581.1
International Mouse Knockout Project Status	Dppa1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000005495	VEGA Gene Model | MGI Sequence Detail	21490	C57BL/6J
transcript	OTTMUST00000012230	VEGA | MGI Sequence Detail	1575	Not Applicable
polypeptide	OTTMUSP00000005643	VEGA | MGI Sequence Detail	116	Not Applicable

All sequences(31) RefSeq(4) UniProt(2)

Polymorphisms

SNPs(147 from dbSNP Build 128)

References

(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:174767 Tang F, et al., Deterministic and stochastic allele specific gene expression in single mouse blastomeres. PLoS One. 2011;6(6):e21208
All references(27)

Other accession IDs

MGI:2144632