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Caskin2 Gene Detail
Summary
  • Symbol
    Caskin2
  • Name
    CASK-interacting protein 2
  • Synonyms
    1600028L06Rik, mKIAA1139
  • Feature Type
    protein coding gene
  • IDs
    MGI:2157062
    NCBI Gene: 140721
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:115799183-115813639 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 80.91 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    92 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2157062
protein coding gene Chr11:115798987-115813658 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019400
protein coding gene Chr11:119865850-119882293 (-)
A/J MGP_AJ_G0019369
protein coding gene Chr11:114623058-114637600 (-)
AKR/J MGP_AKRJ_G0019339
protein coding gene Chr11:118044599-118060288 (-)
BALB/cJ MGP_BALBcJ_G0019343
protein coding gene Chr11:115040543-115054921 (-)
C3H/HeJ MGP_C3HHeJ_G0019149
protein coding gene Chr11:118393760-118408130 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019793
protein coding gene Chr11:123528977-123543354 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017416
protein coding gene Chr11:111646634-111661612 (-)
CAST/EiJ MGP_CASTEiJ_G0018704
protein coding gene Chr11:119733269-119749435 (-)
CBA/J MGP_CBAJ_G0019121
protein coding gene Chr11:128417976-128432346 (-)
DBA/2J MGP_DBA2J_G0019232
protein coding gene Chr11:114049265-114063643 (-)
FVB/NJ MGP_FVBNJ_G0019224
protein coding gene Chr11:113545227-113562010 (-)
LP/J MGP_LPJ_G0019302
protein coding gene Chr11:120247714-120262084 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019257
protein coding gene Chr11:127530059-127544429 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019831
protein coding gene Chr11:118696344-118710714 (-)
PWK/PhJ MGP_PWKPhJ_G0018468
protein coding gene Chr11:115360098-115374894 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018261
protein coding gene Chr11:118444214-118458650 (-)
WSB/EiJ MGP_WSBEiJ_G0018756
protein coding gene Chr11:118658703-118673072 (-)



Homology
more
  • Human Ortholog
    CASKIN2, CASK interacting protein 2
  • Vertebrate Orthologs
    11
  • Human Ortholog
    CASKIN2, CASK interacting protein 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ANKS5B
  • Links
    NCBI Gene ID: 57513
    neXtProt AC: NX_Q8WXE0
    UniProt: Q8WXE0

  • Chr Location
    17q25.1; chr17:75500260-75515583 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000034471 Ensembl Gene Model | MGI Sequence Detail 14457 C57BL/6J ±  kb
    transcript ENSMUST00000041684 Ensembl | MGI Sequence Detail 4929 Not Applicable  
    polypeptide ENSMUSP00000041328 Ensembl | MGI Sequence Detail 1201 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 6
      cDNA 6

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:1920493
    References
    more
    • Summaries
      All 33
      Developmental Gene Expression 1
      Gene Ontology 2
      Phenotypes 8
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.
    last database update
    11/26/2019
    MGI 6.14
    The Jackson Laboratory