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Stard4 Gene Detail
Summary
  • Symbol
    Stard4
  • Name
    StAR-related lipid transfer (START) domain containing 4
  • Synonyms
    4632419C16Rik, 9030213J02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2156764
    NCBI Gene: 170459
  • Gene Overview
    MyGene.info: STARD4
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:33199355-33213862 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 18.18 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    152 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2156764
protein coding gene Chr18:33199142-33213863 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024232
protein coding gene Chr18:31366449-31381181 (-)
A/J MGP_AJ_G0024198
protein coding gene Chr18:30313174-30327904 (-)
AKR/J MGP_AKRJ_G0024167
protein coding gene Chr18:31140723-31155623 (-)
BALB/cJ MGP_BALBcJ_G0024198
protein coding gene Chr18:30382585-30397812 (-)
C3H/HeJ MGP_C3HHeJ_G0023966
protein coding gene Chr18:31209427-31220061 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024640
protein coding gene Chr18:32522965-32537528 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022081
protein coding gene Chr18:30510839-30525478 (-)
CAST/EiJ MGP_CASTEiJ_G0023441
protein coding gene Chr18:31082344-31097057 (-)
CBA/J MGP_CBAJ_G0023934
protein coding gene Chr18:33464121-33478862 (-)
DBA/2J MGP_DBA2J_G0024066
protein coding gene Chr18:29987527-30002602 (-)
FVB/NJ MGP_FVBNJ_G0024032
protein coding gene Chr18:29684191-29698929 (-)
LP/J MGP_LPJ_G0024147
protein coding gene Chr18:31429548-31446245 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024060
protein coding gene Chr18:34784645-34802683 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024688
protein coding gene Chr18:30999527-31014260 (-)
PWK/PhJ MGP_PWKPhJ_G0023184
protein coding gene Chr18:30152793-30167806 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022993
protein coding gene Chr18:31259106-31269485 (-)
WSB/EiJ MGP_WSBEiJ_G0023504
protein coding gene Chr18:30904590-30920307 (-)



Homology
more
  • Human Ortholog
    STARD4, StAR related lipid transfer domain containing 4
  • Vertebrate Orthologs
    10
  • Human Ortholog
    STARD4, StAR related lipid transfer domain containing 4
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 134429
    neXtProt AC: NX_Q96DR4
    UniProt: Q96DR4

  • Chr Location
    5q22.1; chr5:111496033-111512597 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 15874
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: STARD4
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotypes from 1 allele in 1 genetic background
    3 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit decreased liver weight, body weight, and body length. Female mice homozygous for this allele exhibit decreased circulating cholesterol when fed a low cholesterol diet and altered bile composition when fed standard chow.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000024378 Ensembl Gene Model | MGI Sequence Detail 14508 C57BL/6J ±  kb
    transcript ENSMUST00000025236 Ensembl | MGI Sequence Detail 5097 Not Applicable  
    polypeptide ENSMUSP00000025236 Ensembl | MGI Sequence Detail 224 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 19
      cDNA 19

      Microarray probesets 6
    Other
    Accession IDs
    less
    MGI:1924300, MGI:1924404, MGI:2147177, MGI:2147362
    References
    more
    • Summaries
      All 33
      Developmental Gene Expression 4
      Gene Ontology 6
      Phenotypes 3
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:233745 Ferrell JM, et al., Cholesterol 7alpha-hydroxylase-deficient mice are protected from high-fat/high-cholesterol diet-induced metabolic disorders. J Lipid Res. 2016 Jul;57(7):1144-54

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    11/13/2018
    MGI 6.13
    The Jackson Laboratory