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Slc7a12
Gene Detail
 Symbol
Name
ID
Slc7a12
solute carrier family 7 (cationic amino acid transporter, y+ system), member 12
MGI:2156159
Synonyms Asc-2, asc-type amino acid transporter 2, XAT1
Feature Type protein coding gene
Genetic Map
Chromosome 3
3.05 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr3:14480697-14505830 bp, + strand
From VEGA annotation of GRCm38

  25134 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:76812  Vertebrate Homology Class
1 mouse; 2 rat

Protein SuperFamily: amino acid transporter
Gene Tree: Slc7a12

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Targeted(4)
Incidental mutations (data from APF )
Interactions
Slc7a12 interacts with 61 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process amino acid transmembrane transport, amino acid transport
Component cytoplasm, integral component of membrane, ...
Function amino acid transmembrane transporter activity
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (1)    Tissues (1)    Images (1)
Theiler Stages: 23
Assay TypeResults
RNA in situ 1
cDNA source data(13)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(16) Genomic(1) cDNA(13) Other(2)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000026423 (Evidence)
Ensembl Gene ModelENSMUSG00000039710 (Evidence)
Entrez Gene140918 (Evidence)
UniGene215250
DFCITC1585498
DoTSDT.101724083, DT.521927
NIA Mouse Gene IndexU003034
Consensus CDS ProjectCCDS17246.1
International Mouse Knockout Project StatusSlc7a12
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026423 VEGA Gene Model | MGI Sequence Detail 25134 C57BL/6J ±  kb
transcript OTTMUST00000065345 VEGA | MGI Sequence Detail 1741 Not Applicable 
polypeptide OTTMUSP00000032557 VEGA | MGI Sequence Detail 465 Not Applicable 

For the selected sequences
All sequences(33) RefSeq(4) UniProt(3)
Polymorphisms SNPs within 2kb(110 from dbSNP Build 137)    SNPs within 2kb including multiple locations(116)
Protein-related
information
ResourceIDDescription
InterPro IPR002293 Amino acid/polyamine transporter I
References (Earliest) J:73570 Chairoungdua A, et al., Identification and characterization of a novel member of the heterodimeric amino acid transporter family presumed to be associated with an unknown heavy chain. J Biol Chem. 2001 Dec 28;276(52):49390-9
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(23)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory