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Ubox5
Gene Detail
Symbol

Name
ID
Ubox5
U box domain containing 5
MGI:2154658
Synonyms
1500010O06Rik, C330018L13Rik, UIP5
Feature Type
protein coding gene
Genetic Map
Chromosome 2
63.24 cM, cytoband F3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr2:130590002-130630038 bp, - strand
From VEGA annotation of GRCm38

  40037 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8972  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Ubox5

Human
homologs
Human Homolog UBOX5, U-box domain containing 5
NCBI Gene ID 22888
neXtProt AC  NX_O94941
Human Synonyms  hUIP5, RNF37, UBCE7IP5, UIP5
Human Chr (Location)  20p13; chr20:3107573-3159910 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(7) : Gene trapped(2) Targeted(5)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Ubox5 interacts with 235 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (45)    Tissues (45)    Images (3)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 45
cDNA source data(12)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(12) cDNA(12)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000015515 (Evidence)
Ensembl Gene ModelENSMUSG00000027300 (Evidence)
Entrez Gene140629 (Evidence)
EC6.3.2.-
Consensus CDS ProjectCCDS16747.1
International Mouse Knockout Project StatusUbox5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015515 VEGA Gene Model | MGI Sequence Detail 40037 C57BL/6J ±  kb
transcript OTTMUST00000058792 VEGA | MGI Sequence Detail 3131 Not Applicable 
polypeptide OTTMUSP00000028533 VEGA | MGI Sequence Detail 598 Not Applicable 

For the selected sequences
All sequences(42) RefSeq(6) UniProt(7)
Polymorphisms
SNPs within 2kb(82 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR010622 FAST kinase leucine-rich
InterPro IPR013579 FAST kinase-like protein, subdomain 2
InterPro IPR003613 U box domain
InterPro IPR013083 Zinc finger, RING/FYVE/PHD-type
InterPro IPR001841 Zinc finger, RING-type
InterPro IPR017907 Zinc finger, RING-type, conserved site
Protein Ontology PR:000017005 RING finger protein 37
References
(Earliest) J:56275 Martinez-Noel G, et al., A family of structurally related RING finger proteins interacts specifically with the ubiquitin-conjugating enzyme UbcM4. FEBS Lett. 1999 Jul 9;454(3):257-61
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
All references(32)
Other
accession IDs
MGI:1344374, MGI:1924000, MGI:2443749

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory