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Scgb3a2
Gene Detail
Symbol

Name
ID
Scgb3a2
secretoglobin, family 3A, member 2
MGI:2153470
Synonyms
LuLeu1, UGRP1
Feature Type
protein coding gene
Genetic Map
Chromosome 18
23.49 cM, cytoband C-D
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr18:43764289-43767399 bp, + strand
From VEGA annotation of GRCm38

  3111 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:14274  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog

HCOP human homology predictions: SCGB3A2
Gene Tree: Scgb3a2

Human
homologs
SCGB3A2, secretoglobin, family 3A, member 2
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 117156
neXtProt AC: NX_Q96PL1

Human Synonyms: LU103, pnSP-1, PNSP1, UGRP1

Human Chr (Location): 5q32; chr5:147878711-147882193 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human SCGB3A2

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Scgb3a2 interacts with 60 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component extracellular region
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (12 records)
Data Summary: Results (56)    Tissues (38)    Images (4)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 13
Northern blot 27
RT-PCR 16
cDNA source data(12)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(16) Genomic(2) cDNA(12) Primer pair(1) Other(1)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000049045 (Evidence)
Ensembl Gene Model ENSMUSG00000038791 (Evidence)
Entrez Gene 117158 (Evidence)
UniGene 210437
DFCI TC1595969, TC1646100, TC1698774
DoTS DT.101364972, DT.488813, DT.97359105, DT.97359106
NIA Mouse Gene Index U018680
Consensus CDS Project CCDS29220.1
International Mouse Phenotyping Consortium Status Scgb3a2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000049045 VEGA Gene Model | MGI Sequence Detail 3111 C57BL/6J ±  kb
transcript OTTMUST00000125280 VEGA | MGI Sequence Detail 842 Not Applicable 
polypeptide OTTMUSP00000067967 VEGA | MGI Sequence Detail 139 Not Applicable 

For the selected sequences
All sequences(42) RefSeq(7) UniProt(2)
Polymorphisms
RFLP(1) : SNPs within 2kb(66 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR016126 Secretoglobin
Protein Ontology PR:000031676 secretoglobin family 3A member 2
References
(Earliest) J:72388 Niimi T, et al., UGRP1, a Uteroglobin/Clara Cell Secretory Protein-Related Protein, Is a Novel Lung-Enriched Downstream Target Gene for the T/EBP/NKX2.1 Homeodomain Transcription Factor. Mol Endocrinol. 2001 Nov;15(11):2021-36
(Latest) J:220467 Galvis LA, et al., Repression of Igf1 expression by Ezh2 prevents basal cell differentiation in the developing lung. Development. 2015 Apr 15;142(8):1458-69
All references(33)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory