Creld1
Gene Detail

Symbol Name ID

Creld1 cysteine-rich with EGF-like domains 1 MGI:2152539

Feature Type

protein coding gene

Genetic Map

Chromosome 6

52.77 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr6:113483297-113493338 bp, + strand From VEGA annotation of GRCm38   10042 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:32265  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Creld1

Human homologs

Human Homolog		CRELD1, cysteine-rich with EGF-like domains 1
NCBI Gene ID		78987
neXtProt AC		NX_Q96HD1
Human Synonyms		AVSD2, CIRRIN
Human Chr (Location)		3p25.3; chr3:9975524-9987097 (+)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human CRELD1

Alleles and phenotypes

All alleles(15) : Targeted(4) Gene trapped(11)

Gene Ontology (GO) classifications

All GO classifications: (4 annotations)

Process	biological_process
Component	integral to membrane, membrane
Function	calcium ion binding

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (50)    Tissues (10)    Images (19)
Theiler Stages: 23

Assay Type	Results
RNA in situ	50

cDNA source data(81)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(81) cDNA(81)
Microarray probesets(2)

Other database links

VEGA Gene Model	OTTMUSG00000023299 (Evidence)
Ensembl Gene Model	ENSMUSG00000030284 (Evidence)
Entrez Gene	171508 (Evidence)
UniGene	41593
DFCI	TC1575488, TC1587619, TC1602036
DoTS	DT.101216472, DT.531423, DT.99858367, DT.99858369
NIA Mouse Gene Index	U007272
Consensus CDS Project	CCDS20423.1
International Mouse Knockout Project Status	Creld1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000023299	VEGA Gene Model | MGI Sequence Detail	10042	C57BL/6J
transcript	OTTMUST00000056426	VEGA | MGI Sequence Detail	2306	Not Applicable
polypeptide	OTTMUSP00000027118	VEGA | MGI Sequence Detail	420	Not Applicable

All sequences(52) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(60 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR021852	Domain of unknown function DUF3456
InterPro	IPR001881	EGF-like calcium-binding
InterPro	IPR018097	EGF-like calcium-binding, conserved site
InterPro	IPR013032	EGF-like, conserved site
InterPro	IPR002049	EGF-like, laminin
InterPro	IPR000152	EGF-type aspartate/asparagine hydroxylation site
InterPro	IPR000742	Epidermal growth factor-like domain
InterPro	IPR006212	Furin-like repeat
InterPro	IPR009030	Growth factor, receptor
Protein Ontology	PR:000031551	cysteine-rich with EGF-like domain protein 1

References

(Earliest) J:78392 Rupp PA, et al., Identification, genomic organization and mRNA expression of CRELD1, the founding member of a unique family of matricellular proteins. Gene. 2002 Jun 26;293(1-2):47-57
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(35)

Other accession IDs

MGI:2141490