B3gnt3
Gene Detail

Symbol Name ID

B3gnt3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 MGI:2152535

Synonyms

2210008L19Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 8

34.43 cM, cytoband C1
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr8:71691719-71701800 bp, - strand From NCBI annotation of GRCm38   10082 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Mammalian homology

human; rat; cattle; chimpanzee; dog, domestic    (Mammalian Orthology)
Comparative Map (Mouse/Human B3gnt3 ± 2 cM)

Gene Tree: B3gnt3

Human ortholog

B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 NCBI Gene ID 10331
Human Synonyms: B3GAL-T8, B3GN-T3, B3GNT-3, beta3Gn-T3, HP10328, TMEM3
Human Chr19:17905919-17924385 bp, + strand Reference GRCh37.p2 Primary Assembly

Alleles and phenotypes

All alleles(3) : Targeted(2) Gene trapped(1)
 

Mice homozygous for a targeted mutation display increases in thermal pain sensation.

 

Gene Ontology (GO) classifications

All GO classifications: (8 annotations)

Process	protein glycosylation
Component	Golgi apparatus, integral to membrane, ...
Function	galactosyltransferase activity, transferase activity, ...

External Resources: FuncBase

Expression

Literature Summary: (3 records)
Data Summary: Results (130)    Tissues (130)    Images (4)
Theiler Stages: 22, 23, 28

Assay Type	Results
RNA in situ	95
RT-PCR	35

cDNA source data(24)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(25) cDNA(24) Primer pair(1)
Microarray probesets(4)

Other database links

Ensembl Gene Model	ENSMUSG00000031803 (Evidence)
Entrez Gene	72297 (Evidence)
UniGene	290837
DFCI	TC1583281
EC	2.4.1.-
Consensus CDS Project	CCDS22405.1
International Mouse Knockout Project Status	B3gnt3

Sequences

Length	Strain/Species
genomic	72297	NCBI Gene Model | MGI Sequence Detail	10082	C57BL/6J
transcript	NM_028189	RefSeq | MGI Sequence Detail	2103	C57BL/6
polypeptide	Q5JCS9	UniProt | EBI | MGI Sequence Detail	372	Not Applicable

All sequences(19) RefSeq(2) UniProt(3)

Polymorphisms

SNPs(74 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR002659	Glycosyl transferase, family 31
Protein Ontology	PR:000004593	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3

Graphical View of Protein Domain Structure

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(33)

Other accession IDs

MGI:1919547