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B3gnt3
Gene Detail
 Symbol
Name
ID
B3gnt3
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3
MGI:2152535
Synonyms 2210008L19Rik
Feature Type protein coding gene
Genetic Map
Chromosome 8
34.43 cM, cytoband C1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr8:71691719-71701800 bp, - strand
From NCBI annotation of GRCm38

  10082 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:113516  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 4 zebrafish

Gene Tree: B3gnt3

Human
homologs
Human Homolog B3GNT3, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3
NCBI Gene ID 10331
neXtProt AC  NX_Q9Y2A9
Human Synonyms  B3GAL-T8, B3GN-T3, B3GNT-3, beta3Gn-T3, HP10328, TMEM3
Human Chr (Location)  19p13.1; chr19:17795110-17813576 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a targeted mutation display increases in thermal pain sensation.
 
Interactions
B3gnt3 interacts with 87 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process protein glycosylation
Component Golgi apparatus, integral component of membrane, ...
Function beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity, galactosyltransferase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (130)    Tissues (130)    Images (4)
Theiler Stages: 22, 23, 28
Assay TypeResults
RNA in situ 95
RT-PCR 35
cDNA source data(25)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(26) cDNA(25) Primer pair(1)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000031803 (Evidence)
Entrez Gene72297 (Evidence)
UniGene290837
DFCITC1583281
EC2.4.1.146
Consensus CDS ProjectCCDS22405.1
International Mouse Knockout Project StatusB3gnt3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 72297 NCBI Gene Model | MGI Sequence Detail 10082 C57BL/6J ±  kb
transcript NM_028189 RefSeq | MGI Sequence Detail 2103 C57BL/6 
polypeptide Q5JCS9 UniProt | EBI | MGI Sequence Detail 372 Not Applicable 

For the selected sequences
All sequences(23) RefSeq(6) UniProt(3)
Polymorphisms SNPs within 2kb(116 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002659 Glycosyl transferase, family 31
Protein Ontology PR:000004593 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)
Other
accession IDs
MGI:1919547

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory