About   Help   FAQ
Pop5 Gene Detail
Summary
  • Symbol
    Pop5
  • Name
    processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
  • Synonyms
    1500019J17Rik, 2700077E03Rik, Rnasep3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2151221
    NCBI Gene: 117109
  • Gene Overview
    MyGene.info: POP5
Location & Maps
more
  • Sequence Map
    Chr5:115235836-115245351 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      9516 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    POP5, POP5 homolog, ribonuclease P/MRP subunit
  • Vertebrate Orthologs
    10
  • Human Ortholog
    POP5, POP5 homolog, ribonuclease P/MRP subunit
    Orthology source: HGNC, HomoloGene
  • Synonyms
    hPop5, HSPC004, RPP2, RPP20
  • Links
    NCBI Gene ID: 51367
    neXtProt AC: NX_Q969H6

  • Chr Location
    12q24.31; chr12:120579045-120581452 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    14
  • Chemically induced (other)
    1
  • Gene trapped
    11
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Pop5
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014635 VEGA Gene Model | MGI Sequence Detail 9516 C57BL/6J ±  kb
transcript OTTMUST00000034705 VEGA | MGI Sequence Detail 1025 Not Applicable  
polypeptide OTTMUSP00000015536 VEGA | MGI Sequence Detail 169 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    46 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000013026 ribonuclease P/MRP protein subunit POP5
  • EC
  • InterPro Domains
    IPR002759 Ribonuclease P/MRP protein subunit
    IPR016819 Ribonuclease P/MRP protein subunit Pop5
Molecular
Reagents
less
  • All nucleic 35
    cDNA 35

    Microarray probesets 4
Other
Accession IDs
less
MGI:1915085, MGI:1919879, MGI:2141138
References
more
  • Summaries
    All 30
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 11
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
  • Latest
    J:198500 Nakahara M, et al., Gene-trap mutagenesis using Mol/MSM-1 embryonic stem cells from MSM/Ms mice. Mamm Genome. 2013 Jun;24(5-6):228-39

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/17/2016
MGI 6.03
The Jackson Laboratory