Prelp
Gene Detail

Symbol Name ID

Prelp proline arginine-rich end leucine-rich repeat MGI:2151110

Synonyms

7330409J17Rik, SLRR2A

Feature Type

protein coding gene

Genetic Map

Chromosome 1

58.02 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr1:133910304-133921414 bp, - strand From VEGA annotation of GRCm38   11111 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:2041  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: class II small leucine-rich proteoglycan
Gene Tree: Prelp

Human homologs

Human Homolog		PRELP, proline/arginine-rich end leucine-rich repeat protein
NCBI Gene ID		5549
neXtProt AC		NX_P51888
Human Synonyms		MST161, MSTP161, SLRR2A
Human Chr (Location)		1q32; chr1:203444883-203460480 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(1) : Targeted(1)

Gene Ontology (GO) classifications

All GO classifications: (7 annotations)

Process	cell aging
Component	extracellular matrix, extracellular region, ...
Function	extracellular matrix structural constituent, heparin binding

External Resources: FuncBase

Expression

Literature Summary: (5 records)
Data Summary: Results (26)    Tissues (20)   
Theiler Stages: 11, 19, 22, 23, 25, 28

Assay Type	Results
Immunohistochemistry	8
RNA in situ	5
Northern blot	12
Western blot	1

cDNA source data(62)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(65) Genomic(2) cDNA(63)
Microarray probesets(5)

Other database links

VEGA Gene Model	OTTMUSG00000026872 (Evidence)
Ensembl Gene Model	ENSMUSG00000041577 (Evidence)
Entrez Gene	116847 (Evidence)
UniGene	214514
DFCI	TC1575610
DoTS	DT.50314974
NIA Mouse Gene Index	U021780
Consensus CDS Project	CCDS15300.1
International Mouse Knockout Project Status	Prelp

Sequences

Length	Strain/Species
genomic	OTTMUSG00000026872	VEGA Gene Model | MGI Sequence Detail	11111	C57BL/6J
transcript	OTTMUST00000066465	VEGA | MGI Sequence Detail	3615	Not Applicable
polypeptide	OTTMUSP00000033309	VEGA | MGI Sequence Detail	378	Not Applicable

All sequences(33) RefSeq(2) UniProt(3)

Polymorphisms

SNPs(99 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR001611	Leucine-rich repeat
InterPro	IPR000372	Leucine-rich repeat-containing N-terminal
InterPro	IPR027216	Prolargin
Protein Ontology	PR:000013199	prolargin

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:193822 Lumayag S, et al., Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration. Proc Natl Acad Sci U S A. 2013 Feb 5;110(6):E507-16
All references(37)

Other accession IDs

MGI:1925348