About   Help   FAQ
Oas1c
Gene Detail
Symbol

Name
ID
Oas1c
2'-5' oligoadenylate synthetase 1C
MGI:2149633
Synonyms
Oasl5
Feature Type
protein coding gene
Genetic Map
Chromosome 5
60.64 cM
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr5:120800194-120812514 bp, - strand
From VEGA annotation of GRCm38

  12321 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:110815  Vertebrate Homology Class
3 mouse

Protein SuperFamily: oligo(A) synthetase
Gene Tree: Oas1c

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Oas1c interacts with 160 markers (Mir23b, Mir25, Mir26a-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component cellular_component
Function double-stranded RNA binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(26)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(29) Genomic(3) cDNA(26)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000026817 (Evidence)
Ensembl Gene ModelENSMUSG00000001166 (Evidence)
Entrez Gene114643 (Evidence)
UniGene43230
DFCITC1581191, TC1613277
DoTSDT.101716680, DT.496767
Consensus CDS ProjectCCDS19626.1
International Mouse Knockout Project StatusOas1c
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026817 VEGA Gene Model | MGI Sequence Detail 12321 C57BL/6J ±  kb
transcript OTTMUST00000066317 VEGA | MGI Sequence Detail 2291 Not Applicable 
polypeptide OTTMUSP00000033220 VEGA | MGI Sequence Detail 362 Not Applicable 

For the selected sequences
All sequences(47) RefSeq(8) UniProt(4)
Polymorphisms
SNPs within 2kb(2 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR026774 2'-5'-oligoadenylate synthase
InterPro IPR018952 2'-5'-oligoadenylate synthetase 1, domain 2/C-terminal
InterPro IPR006116 2-5-oligoadenylate synthetase, N-terminal
References
(Earliest) J:70792 Shibata S, et al., Cloning of a novel 2',5'-oligoadenylate synthetase-like molecule, Oasl5 in mice. Gene. 2001 Jun 27;271(2):261-71
(Latest) J:192649 Kristiansen H, et al., The oligoadenylate synthetase family: an ancient protein family with multiple antiviral activities. J Interferon Cytokine Res. 2011 Jan;31(1):41-7
All references(24)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/08/2014
MGI 5.20
The Jackson Laboratory