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Ncr3-ps
Pseudogene Detail
Symbol

Name
ID
Ncr3-ps
natural cytotoxicity triggering receptor 3, pseudogene
MGI:2149332
Synonyms
1C7, Ly117, Ncr3
Feature Type
pseudogene
Genetic Map
Chromosome 17
18.59 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr17:35180535-35184662 bp, + strand
From VEGA annotation of GRCm38

  4128 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HCOP human homology predictions: NCR3
Gene Tree: Ncr3-ps
Human
homologs
NCR3, natural cytotoxicity triggering receptor 3
Orthology source: HGNC

IDs:
NCBI Gene ID: 259197
neXtProt AC: NX_O14931

Human Synonyms: 1C7, CD337, LY117, MALS, NKp30

Human Chr (Location): 6p21.3; chr6:31588883-31593019 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human NCR3

Expression
Other mouse links: Expression Atlas
Other vertebrate links: Xenbase LOC100494890    NEW 
Other database
links
VEGA Gene Model OTTMUSG00000033231 (Evidence)
Ensembl Gene Model ENSMUSG00000086076 (Evidence)
Entrez Gene 667612 (Evidence)
International Mouse Phenotyping Consortium Status Ncr3-ps
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033231 VEGA Gene Model | MGI Sequence Detail 4128 C57BL/6J ±  kb
transcript OTTMUST00000083254 VEGA | MGI Sequence Detail 525 Not Applicable 

For the selected sequences
All sequences(8) RefSeq(2)
Polymorphisms
SNPs within 2kb(50 from dbSNP Build 137)
References
(Earliest) J:44259 de Baey A, et al., Complex expression pattern of the TNF region gene LST1 through differential regulation, initiation, and alternative splicing. Genomics. 1997 Nov 1;45(3):591-600
(Latest) J:63758 Sivakamasundari R, et al., Expression and cellular localization of the protein encoded by the 1C7 gene: a recently described component of the MHC. Immunogenetics. 2000 Jul;51(8-9):723-32
All references(10)
Other
accession IDs
MGI:3644572

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory