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Vmn1r239-ps Pseudogene Detail
Summary
  • Symbol
    Vmn1r239-ps
  • Name
    vomeronasal 1 receptor 239, pseudogene
  • Synonyms
    V1rb10
Location &
Maps
more
  • Sequence Map
    ChrX:146235744-146236703 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 68.46 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2148521
 pseudogene ChrX:146235567-146236761 (-)
129S1/SvImJ MGP_129S1SvImJ_G0014917
 pseudogene ChrX:145069570-145070527 (-)
A/J MGP_AJ_G0013575
 pseudogene Chr6:87898166-87899125 (+)
AKR/J MGP_AKRJ_G0013536
 pseudogene Chr6:90354876-90355835 (+)
BALB/cJ MGP_BALBcJ_G0013556
 pseudogene Chr6:87855853-87856812 (+)
C3H/HeJ MGP_C3HHeJ_G0013382
 pseudogene Chr6:94095709-94096668 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015350
 pseudogene ChrX:149161203-149162162 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0013096
 pseudogene Chr6:90500983-90501942 (+)
CBA/J MGP_CBAJ_G0013374
 pseudogene Chr6:97298383-97299342 (+)
DBA/2J MGP_DBA2J_G0013454
 pseudogene Chr6:87104731-87105690 (+)
FVB/NJ MGP_FVBNJ_G0013454
 pseudogene Chr6:86326348-86327307 (+)
LP/J MGP_LPJ_G0013530
 pseudogene Chr6:91221970-91222927 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0013466
 pseudogene Chr6:101424181-101425140 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0015334
 pseudogene ChrX:144331512-144332471 (-)
PWK/PhJ MGP_PWKPhJ_G0012901
 pseudogene Chr6:86092133-86093209 (+)
SPRET/EiJ MGP_SPRETEiJ_G0012682
 pseudogene Chr6:88903003-88903851 (+)
WSB/EiJ MGP_WSBEiJ_G0013145
 pseudogene Chr6:90647283-90648242 (+)



Homology
more
  • Human Ortholog
    VN1R17P, vomeronasal 1 receptor 17 pseudogene
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    VN1R17P, vomeronasal 1 receptor 17 pseudogene
  • Synonyms
    GPCR
  • Links
    NCBI Gene ID: 441931
    UniProt: Q8TDU5

  • Chr Location
    1q44; chr1:247236868-247237957 (-)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000067262 Ensembl Gene Model | MGI Sequence Detail 960 C57BL/6J ±  kb
transcript ENSMUST00000127465 Ensembl | MGI Sequence Detail 960 Not Applicable  
polypeptide ENSMUSP00000158116 Ensembl | MGI Sequence Detail 310 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR004072 Vomeronasal receptor, type 1
References
more
  • Summaries
    All 7
    Gene Ontology 1
  • Earliest
    J:66234 Del Punta K, et al., Sequence diversity and genomic organization of vomeronasal receptor genes in the mouse. Genome Res. 2000 Dec;10(12):1958-67
  • Latest
    J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;20(1):10-18
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory