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Vmn1r42 Gene Detail
Summary
  • Symbol
    Vmn1r42
  • Name
    vomeronasal 1 receptor 42
  • Synonyms
    V1ra6
  • Feature Type
    protein coding gene
  • IDs
    MGI:2148511
    NCBI Gene: 113848
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:89844518-89845615 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 40.02 cM, cytoband D2
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    18 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2148511
protein coding gene Chr6:89842573-89876413 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031023
protein coding gene Chr6:91297002-91298099 (-)
A/J MGP_AJ_G0030990
protein coding gene Chr6:87843995-87845091 (-)
AKR/J MGP_AKRJ_G0030921
protein coding gene Chr6:90297974-90299071 (-)
BALB/cJ MGP_BALBcJ_G0031003
protein coding gene Chr6:87805692-87806789 (-)
C3H/HeJ MGP_C3HHeJ_G0030708
protein coding gene Chr6:94146333-94147430 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031459
protein coding gene Chr6:93745867-93746964 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0030112
protein coding gene Chr6:90432368-90433465 (-)
CBA/J MGP_CBAJ_G0030687
protein coding gene Chr6:97241265-97242362 (-)
DBA/2J MGP_DBA2J_G0030843
protein coding gene Chr6:87056044-87057141 (-)
FVB/NJ MGP_FVBNJ_G0030796
protein coding gene Chr6:86274214-86275311 (-)
LP/J MGP_LPJ_G0030920
protein coding gene Chr6:91291435-91292532 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030829
protein coding gene Chr6:101374925-101376022 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031487
protein coding gene Chr6:90163651-90164748 (-)
PWK/PhJ MGP_PWKPhJ_G0029827
protein coding gene Chr6:86037545-86038829 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029655
protein coding gene Chr6:88990669-88991766 (-)
WSB/EiJ MGP_WSBEiJ_G0030193
protein coding gene Chr6:90594910-90596007 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 113848 NCBI Gene Model | MGI Sequence Detail 1098 C57BL/6J ±  kb
transcript NM_053221 RefSeq | MGI Sequence Detail 1098 Not Specified  
polypeptide Q8VBS7 UniProt | EBI | MGI Sequence Detail 329 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 8
  • Earliest
    J:21726 Champion KM, et al., Identification of a heritable deficiency of the folate-dependent enzyme 10-formyltetrahydrofolate dehydrogenase in mice. Proc Natl Acad Sci U S A. 1994 Nov 22;91(24):11338-42
  • Latest
    J:152814 Hornberg M, et al., Retinoic acid selectively inhibits death of basal vomeronasal neurons during late stage of neural circuit formation. J Neurochem. 2009 Aug;110(4):1263-75

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory