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Ifit1bl2 Gene Detail
Summary
  • Symbol
    Ifit1bl2
  • Name
    interferon induced protein with tetratricopeptide repeats 1B like 2
  • Synonyms
    2010002M12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2148249
    NCBI Gene: 112419
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:34617049-34640743 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 29.76 cM, cytoband C3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    73 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2148249
protein coding gene Chr19:34617049-34640743 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025063
protein coding gene Chr19:33372732-33399934 (-)
A/J MGP_AJ_G0025039
protein coding gene Chr19:31749429-31784467 (-)
AKR/J MGP_AKRJ_G0025007
protein coding gene Chr19:32853566-32879122 (-)
BALB/cJ MGP_BALBcJ_G0025037
protein coding gene Chr19:31875664-31900267 (-)
C3H/HeJ MGP_C3HHeJ_G0024796
protein coding gene Chr19:32935045-32960695 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025478
protein coding gene Chr19:34373288-34399214 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022893
protein coding gene Chr19:31155356-31161963 (-)
CAST/EiJ MGP_CASTEiJ_G0024263
protein coding gene Chr19:32680765-32708215 (-)
CBA/J MGP_CBAJ_G0024773
protein coding gene Chr19:35954390-35982825 (-)
DBA/2J MGP_DBA2J_G0024905
protein coding gene Chr19:31658899-31683813 (-)
FVB/NJ MGP_FVBNJ_G0024866
protein coding gene Chr19:31485328-31509065 (-)
LP/J MGP_LPJ_G0024991
protein coding gene Chr19:33495637-33523940 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024896
protein coding gene Chr19:35732528-35769039 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025536
protein coding gene Chr19:32935785-32945019 (-)
PWK/PhJ MGP_PWKPhJ_G0024014
protein coding gene Chr19:31440177-31442741 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0024330
protein coding gene Chr19:33005928-33032355 (-)



Homology
more
  • Human Ortholog
    IFIT1, interferon induced protein with tetratricopeptide repeats 1
  • Vertebrate Orthologs
    11
  • Human Ortholog
    IFIT1, interferon induced protein with tetratricopeptide repeats 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C56, G10P1, IFI56, IFI-56, IFI-56K, IFIT-1, IFNAI1, ISG56, P56, RNM561
  • Links
    NCBI Gene ID: 3434
    neXtProt AC: NX_P09914
    UniProt: P09914

  • Chr Location
    10q23.31; chr10:89392546-89406487 (+)  GRCh38.p7

  • Human Ortholog
    IFIT1B, interferon induced protein with tetratricopeptide repeats 1B
    Orthology source: HGNC
  • Synonyms
    bA149I23.6, IFIT1L
  • Links
    NCBI Gene ID: 439996
    neXtProt AC: NX_Q5T764
    UniProt: Q5T764

  • Chr Location
    10q23.31; chr10:89378056-89385205 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 112419 NCBI Gene Model | MGI Sequence Detail 23695 C57BL/6J ±  kb
transcript NM_053217 RefSeq | MGI Sequence Detail 3367 C57BL/6  
polypeptide NP_001349059 RefSeq | MGI Sequence Detail 466 C57BL/6  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR011990 Tetratricopeptide-like helical domain superfamily
    IPR019734 Tetratricopeptide repeat
    IPR013026 Tetratricopeptide repeat-containing domain
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 1
Other
Accession IDs
less
MGI:2147726
References
more
  • Summaries
    All 23
    Gene Ontology 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:233076 Langlais D, et al., The macrophage IRF8/IRF1 regulome is required for protection against infections and is associated with chronic inflammation. J Exp Med. 2016 Apr 4;213(4):585-603

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory