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4930540M05Rik Gene Detail
Summary
  • Symbol
    4930540M05Rik
  • Name
    RIKEN cDNA 4930540M05 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2148236
    NCBI Gene: 112414
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:119896159-119902653 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 56.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2148236
lncRNA gene Chr6:119896159-119902653 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007057
lincRNA gene Chr6:122735552-122742026 (-)
A/J MGP_AJ_G0007053
lincRNA gene Chr6:118030680-118037159 (-)
AKR/J MGP_AKRJ_G0007022
lincRNA gene Chr6:121203843-121210057 (-)
BALB/cJ MGP_BALBcJ_G0007028
lincRNA gene Chr6:117797442-117803909 (-)
C3H/HeJ MGP_C3HHeJ_G0006895
lincRNA gene Chr6:63104320-63110797 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007194
lincRNA gene Chr6:125870419-125877405 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0006884
lincRNA gene Chr6:121645974-121652468 (-)
CBA/J MGP_CBAJ_G0006953
lincRNA gene Chr6:130865308-130871775 (-)
DBA/2J MGP_DBA2J_G0006975
lincRNA gene Chr6:116927503-116934010 (-)
FVB/NJ MGP_FVBNJ_G0006999
lincRNA gene Chr6:116043560-116050771 (-)
LP/J MGP_LPJ_G0007060
lincRNA gene Chr6:122740273-122746780 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006979
lincRNA gene Chr6:134846309-134852794 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007199
lincRNA gene Chr6:121234978-121243065 (-)
PWK/PhJ MGP_PWKPhJ_G0006824
lincRNA gene Chr6:115950713-115957435 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006734
lincRNA gene Chr6:119967251-119973677 (-)
WSB/EiJ MGP_WSBEiJ_G0006942
lincRNA gene Chr6:121516659-121523135 (-)



Homology
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097831 Ensembl Gene Model | MGI Sequence Detail 6495 C57BL/6J ±  kb
transcript ENSMUST00000180527 Ensembl | MGI Sequence Detail 2068 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 8
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory