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Snora62 Gene Detail
Summary
  • Symbol
    Snora62
  • Name
    small nucleolar RNA, H/ACA box 62
  • Synonyms
    E2, MBI-136, Rnu108
  • Feature Type
    snoRNA gene
  • IDs
    MGI:2148179
    NCBI Gene: 104433
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr9:119959500-119959629 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 71.41 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    34 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2148179
 snoRNA gene Chr9:119959481-119959629 (+)
129S1/SvImJ MGP_129S1SvImJ_G0039570
 snoRNA gene Chr9:122958049-122958197 (+)
A/J MGP_AJ_G0039569
 snoRNA gene Chr9:118347788-118347936 (+)
AKR/J MGP_AKRJ_G0039492
 snoRNA gene Chr9:121448301-121448449 (+)
BALB/cJ MGP_BALBcJ_G0039547
 snoRNA gene Chr9:118244300-118244448 (+)
C3H/HeJ MGP_C3HHeJ_G0039207
 snoRNA gene Chr9:121928466-121928614 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040099
 snoRNA gene Chr9:126319450-126319598 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0038334
 snoRNA gene Chr9:121934003-121934151 (+)
CBA/J MGP_CBAJ_G0039174
 snoRNA gene Chr9:131034888-131035036 (+)
DBA/2J MGP_DBA2J_G0039368
 snoRNA gene Chr9:117797675-117797823 (+)
FVB/NJ MGP_FVBNJ_G0039320
 snoRNA gene Chr9:116685894-116686042 (+)
LP/J MGP_LPJ_G0039408
 snoRNA gene Chr9:123289079-123289227 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0039325
 snoRNA gene Chr9:131977845-131977993 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040196
 snoRNA gene Chr9:121842370-121842518 (+)
PWK/PhJ MGP_PWKPhJ_G0038012
 snoRNA gene Chr9:118238756-118238904 (+)
SPRET/EiJ MGP_SPRETEiJ_G0037764
 snoRNA gene Chr9:121945037-121945185 (+)
WSB/EiJ MGP_WSBEiJ_G0038560
 snoRNA gene Chr9:121733998-121734146 (+)



Homology
more
  • Human Ortholog
    SNORA62, small nucleolar RNA, H/ACA box 62
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SNORA62, small nucleolar RNA, H/ACA box 62
  • Synonyms
    E2, E2-1, RNE2, RNU108
  • Links
    NCBI Gene ID: 6044

  • Chr Location
    3p22.1; chr3:39411054-39411207 (+)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 104433 NCBI Gene Model | MGI Sequence Detail 130 C57BL/6J ±  kb
transcript NR_002902 RefSeq | MGI Sequence Detail 130 C57BL/6  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 9
    Gene Ontology 1
  • Earliest
    J:40075 Selvamurugan N, et al., Intracellular localization and unique conserved sequences of three small nucleolar RNAs. Nucleic Acids Res. 1997 Apr 15;25(8):1591-6
  • Latest
    J:69860 Huttenhofer A, et al., RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J. 2001 Jun 1;20(11):2943-53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory