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D330045A20Rik Gene Detail
Summary
  • Symbol
    D330045A20Rik
  • Name
    RIKEN cDNA D330045A20 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2147848
    NCBI Gene: 102871
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:139480367-139554582 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 61.35 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    154 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2147848
protein coding gene ChrX:139480226-139554589 (.)
129S1/SvImJ MGP_129S1SvImJ_G0036123
protein coding gene ChrX:136972421-137053032 (+)
A/J MGP_AJ_G0036102
protein coding gene ChrX:136357640-136434191 (+)
AKR/J MGP_AKRJ_G0036026
protein coding gene ChrX:140747856-140825856 (+)
BALB/cJ MGP_BALBcJ_G0036091
protein coding gene ChrX:134715033-134791726 (+)
C3H/HeJ MGP_C3HHeJ_G0035800
protein coding gene ChrX:136996579-137073983 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036616
protein coding gene ChrX:141018313-141092375 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033441
protein coding gene ChrX:128127990-128200644 (+)
CAST/EiJ MGP_CASTEiJ_G0035091
protein coding gene ChrX:117811376-117897198 (+)
CBA/J MGP_CBAJ_G0035777
protein coding gene ChrX:145275403-145392752 (+)
DBA/2J MGP_DBA2J_G0035934
protein coding gene ChrX:135551117-135625388 (+)
FVB/NJ MGP_FVBNJ_G0035868
protein coding gene ChrX:134780030-134857736 (+)
LP/J MGP_LPJ_G0036026
protein coding gene ChrX:137954324-138030307 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035905
protein coding gene ChrX:152833959-152916487 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036652
protein coding gene ChrX:136297193-136371798 (+)
PWK/PhJ MGP_PWKPhJ_G0034784
protein coding gene ChrX:114741134-114816242 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034611
protein coding gene ChrX:118344474-118420180 (+)
WSB/EiJ MGP_WSBEiJ_G0035226
protein coding gene ChrX:134602854-134698661 (+)



Homology
more
  • Human Ortholog
    RADX, RPA1 related single stranded DNA binding protein, X-linked
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RADX, RPA1 related single stranded DNA binding protein, X-linked
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CXorf57
  • Links
    NCBI Gene ID: 55086
    neXtProt AC: NX_Q6NSI4
    UniProt: Q6NSI4

  • Chr Location
    Xq22.3; chrX:106611930-106679443 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000042498 Ensembl Gene Model | MGI Sequence Detail 74216 C57BL/6J ±  kb
transcript ENSMUST00000113030 Ensembl | MGI Sequence Detail 3736 Not Applicable  
polypeptide ENSMUSP00000108653 Ensembl | MGI Sequence Detail 850 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR012340 Nucleic acid-binding, OB-fold
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory