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AW112010 Gene Detail
Summary
  • Symbol
    AW112010
  • Name
    expressed sequence AW112010
Location &
Maps
more
  • Sequence Map
    Chr19:11024976-11027930 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 7.59 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    192 from dbSNP Build 142
  • Strain Annotations
    31
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2147706
 lncRNA gene Chr19:11021549-11033246 (-)
129S1/SvImJ ENSMUSG00200048937
 protein coding gene Chr19:7703319-7712344 (-)
129S1/SvImJ ENSMUSG00200053319
 lncRNA gene Chr19:7700628-7712315 (-)
A/J ENSMUSG00195052689
 protein coding gene Chr19:7916329-7925337 (-)
A/J ENSMUSG00195053425
 lncRNA gene Chr19:7913616-7925308 (-)
AKR/J ENSMUSG00220044515
 protein coding gene Chr19:7824210-7833235 (-)
AKR/J ENSMUSG00220051383
 lncRNA gene Chr19:7821519-7833206 (-)
BALB/cJ ENSMUSG00180036471
 protein coding gene Chr19:8278060-8287081 (-)
BALB/cJ ENSMUSG00180051516
 lncRNA gene Chr19:8275369-8287052 (-)
C3H/HeJ ENSMUSG00175014955
 lncRNA gene Chr19:7546377-7558079 (-)
C3H/HeJ ENSMUSG00175010645
 protein coding gene Chr19:7549095-7558108 (-)
C57BL/6NJ ENSMUSG00215048743
 lncRNA gene Chr19:7617944-7629630 (-)
C57BL/6NJ ENSMUSG00215039984
 protein coding gene Chr19:7620634-7629659 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005285
 lincRNA gene Chr19:8299043-8301993 (-)
CAST/EiJ ENSTCUG00005043900
 lncRNA gene Chr19:7427377-7439057 (-)
CBA/J ENSMUSG00210050482
 lncRNA gene Chr19:7744942-7756643 (-)
CBA/J ENSMUSG00210043427
 protein coding gene Chr19:7747660-7756672 (-)
DBA/2J ENSMUSG00185051029
 protein coding gene Chr19:8157388-8166400 (-)
DBA/2J ENSMUSG00185053242
 lncRNA gene Chr19:8154670-8166371 (-)
FVB/NJ ENSMUSG00205024524
 protein coding gene Chr19:7638718-7647732 (-)
FVB/NJ ENSMUSG00205053461
 lncRNA gene Chr19:7635995-7647703 (-)
JF1/MsJ ENSUMUG00000056971
 lncRNA gene Chr19:8275508-8287183 (-)
LP/J ENSMUSG00230054256
 lncRNA gene Chr19:9075255-9086942 (-)
LP/J ENSMUSG00230052078
 protein coding gene Chr19:9077946-9086971 (-)
NOD/ShiLtJ ENSMUSG00190052277
 lncRNA gene Chr19:7373185-7384872 (-)
NOD/ShiLtJ ENSMUSG00190035525
 protein coding gene Chr19:7375876-7384901 (-)
NZO/HlLtJ ENSMUSG00225043872
 protein coding gene Chr19:12786789-12795814 (-)
NZO/HlLtJ ENSMUSG00225047222
 lncRNA gene Chr19:12784098-12795785 (-)
PWK/PhJ ENSLUMG00010008581
 lncRNA gene Chr19:7673379-7685049 (-)
SPRET/EiJ ENSMSPG00010050997
 lncRNA gene Chr19:7505146-7516884 (-)
WSB/EiJ ENSIUOG00005051755
 lncRNA gene Chr19:7275424-7287086 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit increased susceptibility to S. Typhimurium infection, decreased susceptibility to DSS-induced colitis, and a defect in interleukin-12b and interleukin-6 production in response to LPS treatment.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    64
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 107350 NCBI Gene Model | MGI Sequence Detail 2955 C57BL/6J ±  kb
    transcript NR_102366 RefSeq | MGI Sequence Detail 790 C57BL/6  
    polypeptide Q3U6J0 UniProt | EBI | MGI Sequence Detail 78 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    Molecular
    Reagents
    less
    • All nucleic 64
      cDNA 64

      Microarray probesets 3
    References
    more
    • Summaries
      All 28
      Phenotypes 11
    • Earliest
      J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
    • Latest
      J:360865 Jiang HC, et al., CD20/MS4A1 is a mammalian olfactory receptor expressed in a subset of olfactory sensory neurons that mediates innate avoidance of predators. Nat Commun. 2024 Apr 18;15(1):3360
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/01/2026
    MGI 6.24     		The Jackson Laboratory