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Rrp12 Gene Detail
Summary
  • Symbol
    Rrp12
  • Name
    ribosomal RNA processing 12 homolog (S. cerevisiae)
  • Synonyms
    mKIAA0690
  • Feature Type
    protein coding gene
  • IDs
    MGI:2147437
    NCBI Gene: 107094
  • Gene Overview
    MyGene.info: RRP12
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:41862852-41896153 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 35.36 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    221 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2147437
protein coding gene Chr19:41862851-41896153 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025129
protein coding gene Chr19:41158817-41198141 (-)
A/J MGP_AJ_G0025106
protein coding gene Chr19:39179759-39213202 (-)
AKR/J MGP_AKRJ_G0025074
protein coding gene Chr19:40472837-40505982 (-)
BALB/cJ MGP_BALBcJ_G0025100
protein coding gene Chr19:39240483-39273947 (-)
C3H/HeJ MGP_C3HHeJ_G0024860
protein coding gene Chr19:40620352-40655260 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025544
protein coding gene Chr19:42241118-42274710 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022957
protein coding gene Chr19:38536595-38572612 (-)
CAST/EiJ MGP_CASTEiJ_G0024325
protein coding gene Chr19:40283287-40324814 (-)
CBA/J MGP_CBAJ_G0024840
protein coding gene Chr19:44291193-44330208 (-)
DBA/2J MGP_DBA2J_G0024972
protein coding gene Chr19:39029451-39062900 (-)
FVB/NJ MGP_FVBNJ_G0024933
protein coding gene Chr19:38805707-38840269 (-)
LP/J MGP_LPJ_G0025058
protein coding gene Chr19:41153602-41186985 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024964
protein coding gene Chr19:43920113-43954982 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025601
protein coding gene Chr19:40507829-40545408 (-)
PWK/PhJ MGP_PWKPhJ_G0024075
protein coding gene Chr19:38907708-38943227 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023878
protein coding gene Chr19:39252961-39285537 (-)
WSB/EiJ MGP_WSBEiJ_G0024395
protein coding gene Chr19:40658506-40693261 (-)



Homology
more
  • Human Ortholog
    RRP12, ribosomal RNA processing 12 homolog
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RRP12, ribosomal RNA processing 12 homolog
    Orthology source: HomoloGene, HGNC
  • Synonyms
    KIAA0690
  • Links
    NCBI Gene ID: 23223
    neXtProt AC: NX_Q5JTH9
    UniProt: Q5JTH9

  • Chr Location
    10q24.1; chr10:97356701-97401370 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 22370
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: RRP12
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000035049 Ensembl Gene Model | MGI Sequence Detail 33302 C57BL/6J ±  kb
transcript ENSMUST00000038677 Ensembl | MGI Sequence Detail 4319 Not Applicable  
polypeptide ENSMUSP00000039853 Ensembl | MGI Sequence Detail 1295 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 61
    cDNA 61

    Microarray probesets 6
Other
Accession IDs
less
MGI:2147450
References
more
  • Summaries
    All 25
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:83413 Okazaki N, et al., Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. DNA Res. 2003 Feb 28;10(1):35-48
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory