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Catsperd
Gene Detail
Symbol

Name
ID
Catsperd
catsper channel auxiliary subunit delta
MGI:2147030
Synonyms
4921529N20Rik, 4933402B14Rik, Gm6095, Tmem146
Feature Type
protein coding gene
Genetic Map
Chromosome 17
29.43 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr17:56628142-56634593 bp
From MGI annotation of GRCm38

  6452 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:51896  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog

HCOP human homology predictions: CATSPERD
Gene Tree: Catsperd

Human
homologs
CATSPERD, catsper channel auxiliary subunit delta
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 257062
neXtProt AC: NX_Q86XM0

Human Synonyms: TMEM146

Human Chr (Location): 19p13.3; chr19:5720401-5778734 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from APF )
 
Mice homozygous for a deletion in this gene display male infertility. Hyperactivity of sperm fails to develop under capacitating conditions.
 
Interactions
Catsperd interacts with 45 markers (Mir1a-1, Mir1a-2, Mir18, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (14 annotations)
Process cell differentiation, multicellular organismal development, ...
Component CatSper complex, cell projection, ...
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(9)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(10) Genomic(1) cDNA(9)
Microarray probesets(4)
Other database
links
Ensembl Gene Model ENSMUSG00000040828 (Evidence)
Entrez Gene 106757 (Evidence)
UniGene 23401
DFCI TC1586184
DoTS DT.110555843, DT.91585061, DT.97373054
NIA Mouse Gene Index U131334
Consensus CDS Project CCDS50153.1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040828 Ensembl Gene Model | MGI Sequence Detail 36314 C57BL/6J ±  kb
transcript ENSMUST00000112979 Ensembl | MGI Sequence Detail 2565 Not Applicable 
polypeptide ENSMUSP00000108603 Ensembl | MGI Sequence Detail 805 Not Applicable 

For the selected sequences
All sequences(67) RefSeq(48) UniProt(1)
Polymorphisms
SNPs within 2kb(142 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR028751 Cation channel sperm-associated protein subunit delta
Protein Ontology PR:000031295 cation channel sperm-associated protein subunit delta
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:214399 Chung JJ, et al., Structurally distinct Ca(2+) signaling domains of sperm flagella orchestrate tyrosine phosphorylation and motility. Cell. 2014 May 8;157(4):808-22
All references(26)
Other
accession IDs
MGI:1918194, MGI:3779551

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory