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Catsperd
Gene Detail
 Symbol
Name
ID
Catsperd
catsper channel auxiliary subunit delta
MGI:2147030
Synonyms 4921529N20Rik, 4933402B14Rik, Gm6095, Tmem146
Feature Type protein coding gene
Genetic Map
Chromosome 17
29.43 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr17:56628142-56634593 bp
From MGI annotation of GRCm38

  6452 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:51896  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog

Gene Tree: Catsperd

Human
homologs
Human Homolog CATSPERD, catsper channel auxiliary subunit delta
NCBI Gene ID 257062
neXtProt AC  NX_Q86XM0
Human Synonyms  TMEM146
Human Chr (Location)  19p13.3; chr19:5720677-5778731 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from APF )
 
Mice homozygous for a deletion in this gene display male infertility. Hyperactivity of sperm fails to develop under capacitating conditions.
 
Interactions
Catsperd interacts with 45 markers (Mir1a-1, Mir1a-2, Mir18, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (14 annotations)
Process cell differentiation, multicellular organismal development, ...
Component CatSper complex, cell projection, ...
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(9)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(10) Genomic(1) cDNA(9)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000040828 (Evidence)
Entrez Gene106757 (Evidence)
UniGene23401
DFCITC1586184
DoTSDT.110555843, DT.91585061, DT.97373054
NIA Mouse Gene IndexU131334
Consensus CDS ProjectCCDS50153.1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 106757 NCBI Gene Model | MGI Sequence Detail 36314 C57BL/6J ±  kb
transcript NM_175350 RefSeq | MGI Sequence Detail 2565 C57BL/6 
polypeptide E9Q9F6 UniProt | EBI | MGI Sequence Detail 805 Not Applicable 

For the selected sequences
All sequences(65) RefSeq(46) UniProt(1)
Polymorphisms SNPs within 2kb(142 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000031295 cation channel sperm-associated protein subunit delta
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:182472 Chung JJ, et al., A novel gene required for male fertility and functional CATSPER channel formation in spermatozoa. Nat Commun. 2011 Jan 11;2:153
All references(26)
Other
accession IDs
MGI:1918194, MGI:3779551

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory