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Ildr1
Gene Detail
Symbol

Name
ID
Ildr1
immunoglobulin-like domain containing receptor 1
MGI:2146574
Feature Type
protein coding gene
Genetic Map
Chromosome 16
25.88 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr16:36693978-36726804 bp, + strand
From VEGA annotation of GRCm38

  32827 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:15892  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

HCOP human homology predictions: ILDR1
Gene Tree: Ildr1

Human
homologs
ILDR1, immunoglobulin-like domain containing receptor 1
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 286676
neXtProt AC: NX_Q86SU0

Human Synonyms: DFNB42, ILDR1alpha, ILDR1alpha', ILDR1beta

Human Chr (Location): 3q13.33; chr3:121987323-122060516 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human ILDR1

Mutations,
alleles, and
phenotypes
All mutations/alleles(7) : Gene trapped(4) Targeted(3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
 
Mice homozygous for a gene trap allele exhibit impaired lipid-induced cholecystokinin secretion.
 
Interactions
Ildr1 interacts with 203 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (8)    Tissues (1)    Images (8)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 8
cDNA source data(54)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: ZFIN ildr1a, ildr1b    NEW 
Molecular
reagents
All nucleic(54) cDNA(54)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000014981 (Evidence)
Ensembl Gene Model ENSMUSG00000022900 (Evidence)
Entrez Gene 106347 (Evidence)
UniGene 17807
DFCI TC1592669, TC1589830, TC1579250
DoTS DT.101137367, DT.60106452, DT.40169142, DT.101308625
NIA Mouse Gene Index U017078
Consensus CDS Project CCDS49841.1, CCDS70718.1, CCDS70719.1
International Mouse Phenotyping Consortium Status Ildr1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014981 VEGA Gene Model | MGI Sequence Detail 32827 C57BL/6J ±  kb
transcript OTTMUST00000035561 VEGA | MGI Sequence Detail 3042 Not Applicable 
polypeptide OTTMUSP00000015935 VEGA | MGI Sequence Detail 537 Not Applicable 

For the selected sequences
All sequences(48) RefSeq(8) UniProt(1)
Polymorphisms
SNPs within 2kb(236 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007110 Immunoglobulin-like domain
InterPro IPR013783 Immunoglobulin-like fold
InterPro IPR003599 Immunoglobulin subtype
InterPro IPR008664 LISCH7
Protein Ontology PR:000009006 immunoglobulin-like domain-containing receptor 1
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:217755 Morozko EL, et al., ILDR1 null mice, a model of human deafness DFNB42, show structural aberrations of tricellular tight junctions and degeneration of auditory hair cells. Hum Mol Genet. 2015 Feb 1;24(3):609-24
All references(34)
Other
accession IDs
MGI:2146582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/30/2015
MGI 5.22
The Jackson Laboratory